C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type X, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105511 Col10a1-001 ENSMUSG00000039462 10090 + 10:34389981-34397085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLungENSMUST00000105511
Transcript ID Brain Heart Lung
ENSMUST00000105511 0.124±0.04 0.484±0.08 0.700±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001958 IEA endochondral ossification
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005581 IDA collagen trimer
GO:0005938 IDA cell cortex
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243222 COL10A1-201 protein_coding Homo_sapiens 0 2198
ENST00000327673 COL10A1-001 protein_coding Homo_sapiens 0 2185
ENST00000452729 COL10A1-003 protein_coding Homo_sapiens 0 749

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