C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 6430573F11 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039620 6430573F11Rik 10090 + 8:36457548-36514320 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000125492 6430573F11Rik-004 36505489-36512593 processed_transcript
  ENSMUST00000135373 6430573F11Rik-002 36457548-36512956 protein_coding
  ENSMUST00000147525 6430573F11Rik-001 36457574-36514320 protein_coding
  ENSMUST00000152039 6430573F11Rik-003 36458182-36511591 nonsense_mediated_decay
  ENSMUST00000171777 6430573F11Rik-201 36489191-36513013 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125492ENSMUST00000135373ENSMUST00000147525ENSMUST00000152039ENSMUST00000171777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125492 N/A N/A N/A 5.347±0.00 0.410±0.00 0.350±0.00 0.295±0.00 N/A 0.137±0.00 0.232±0.00 0.139±0.00 2.089±0.81 3.200±2.06 0.395±0.17
ENSMUST00000135373 0.826±0.26 0.988±0.20 0.790±0.02 0.198±0.00 1.171±0.33 0.403±0.13 0.203±0.05 0.772±0.27 0.660±0.46 0.313±0.17 0.102±0.05 0.913±0.34 0.748±0.37 0.353±0.00
ENSMUST00000147525 N/A 0.327±0.00 N/A 0.296±0.16 N/A 0.165±0.00 0.091±0.00 N/A 0.458±0.14 N/A 0.024±0.00 0.424±0.26 N/A 0.043±0.00
ENSMUST00000152039 N/A N/A N/A 5.800±0.00 N/A N/A 0.320±0.00 N/A N/A N/A 0.133±0.03 2.006±1.39 3.527±2.67 0.244±0.16
ENSMUST00000171777 0.383±0.09 N/A 1.185±0.06 0.799±0.09 N/A N/A 0.262±0.18 N/A 0.176±0.13 0.297±0.01 0.066±0.00 1.546±0.89 0.926±0.25 0.222±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VH CIL_0003VH_0002 CGP 8:36216064-36514320
CIL_0003VG CIL_0003VG_0002 CGP 8:36457548-36953143

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020145 zgc:73340 zgc:73340 protein_coding Danio_rerio
ENSG00000250305 KIAA1456 KIAA1456 protein_coding Homo_sapiens

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