C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003VG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000250305-ENSG00000164741 CGP 9606 8:12945642-13515658
GeneTranscriptPositionBiotype
ENSG00000164741 (DLC1)
DLC1 Rho GTPase activating protein 		ENST00000276297 (DLC1-001) 13083361-13514886 protein_coding
ENST00000316609 (DLC1-003) 13214575-13514765 protein_coding
ENST00000358919 (DLC1-002) 13085189-13133474 protein_coding
ENST00000503161 (DLC1-016) 13100606-13276873 protein_coding
ENST00000506171 (DLC1-010) 13214267-13276310 processed_transcript
ENST00000509922 (DLC1-009) 13100560-13276784 processed_transcript
ENST00000510250 (DLC1-017) 13094929-13100905 retained_intron
ENST00000510318 (DLC1-006) 13085555-13096037 processed_transcript
ENST00000511869 (DLC1-004) 13304577-13514887 protein_coding
ENST00000512044 (DLC1-005) 13085577-13276546 protein_coding
ENST00000513883 (DLC1-007) 13094823-13096078 processed_transcript
ENST00000515225 (DLC1-012) 13100689-13133289 processed_transcript
ENST00000517333 (DLC1-013) 13499822-13515658 processed_transcript
ENST00000517868 (DLC1-019) 13498859-13499241 protein_coding
ENST00000520226 (DLC1-008) 13085593-13116244 protein_coding
ENST00000521730 (DLC1-018) 13086232-13088739 retained_intron
ENSG00000250305 (KIAA1456)
KIAA1456 		ENST00000400069 (KIAA1456-001) 12951332-13007670 protein_coding
ENST00000447063 (KIAA1456-002) 12945642-13031503 protein_coding
ENST00000524591 (KIAA1456-008) 12945677-13029777 protein_coding
ENST00000525249 (KIAA1456-004) 12945674-12990939 processed_transcript
ENST00000528335 (KIAA1456-005) 12951329-13006233 processed_transcript
ENST00000528753 (KIAA1456-003) 12951635-13007671 protein_coding
ENST00000529706 (KIAA1456-007) 13010262-13021233 retained_intron
ENST00000529978 (KIAA1456-006) 13012013-13026165 retained_intron
ENST00000532376 (KIAA1456-009) 12952022-13012692 protein_coding
ENSG00000251468 (RP11-369K16.1)
 ENST00000506173 (RP11-369K16.1-001) 12958387-12962200 unprocessed_pseudogene
ENSG00000253257 (MTND4P7)
MT-ND4 pseudogene 7 		ENST00000523876 (MTND4P7-001) 13353401-13353530 processed_pseudogene
ENSG00000253932 (RP11-10C8.2)
 ENST00000523495 (RP11-10C8.2-001) 13338574-13342754 antisense
CIL_0003VG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039620-ENSMUSG00000031523 CGP 10090 8:36457548-36953143
GeneTranscriptPositionBiotype
ENSMUSG00000031523 (Dlc1)
deleted in liver cancer 1 		ENSMUST00000033923 (Dlc1-002) 36567751-36613943 protein_coding
ENSMUST00000036104 (Dlc1-006) 36849126-36952357 retained_intron
ENSMUST00000098826 (Dlc1-001) 36567751-36733054 protein_coding
ENSMUST00000145245 (Dlc1-003) 36593231-36613874 retained_intron
ENSMUST00000156312 (Dlc1-004) 36572145-36577269 retained_intron
ENSMUST00000163663 (Dlc1-005) 36570249-36952442 protein_coding
ENSMUST00000178717 (Dlc1-007) 36857711-36952422 retained_intron
ENSMUST00000179501 (Dlc1-009) 36938555-36953143 protein_coding
ENSMUST00000179652 (Dlc1-008) 36935584-36952436 retained_intron
ENSMUSG00000039620 (6430573F11Rik)
RIKEN cDNA 6430573F11 gene 		ENSMUST00000125492 (6430573F11Rik-004) 36505489-36512593 processed_transcript
ENSMUST00000135373 (6430573F11Rik-002) 36457548-36512956 protein_coding
ENSMUST00000147525 (6430573F11Rik-001) 36457574-36514320 protein_coding
ENSMUST00000152039 (6430573F11Rik-003) 36458182-36511591 nonsense_mediated_decay
ENSMUST00000171777 (6430573F11Rik-201) 36489191-36513013 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003VG_0001ENSG00000164741ENST00000276297ENST00000316609ENST00000358919ENST00000503161ENST00000506171ENST00000509922ENST00000510250ENST00000510318ENST00000511869ENST00000512044ENST00000513883ENST00000515225ENST00000517333ENST00000517868ENST00000520226ENST00000521730ENSG00000250305ENST00000400069ENST00000447063ENST00000524591ENST00000525249ENST00000528335ENST00000528753ENST00000529706ENST00000529978ENST00000532376ENSG00000251468ENST00000506173ENSG00000253257ENST00000523876ENSG00000253932ENST00000523495CIL_0003VG_0002ENSMUSG00000031523ENSMUST00000033923ENSMUST00000036104ENSMUST00000098826ENSMUST00000145245ENSMUST00000156312ENSMUST00000163663ENSMUST00000178717ENSMUST00000179501ENSMUST00000179652ENSMUSG00000039620ENSMUST00000125492ENSMUST00000135373ENSMUST00000147525ENSMUST00000152039ENSMUST00000171777
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003VG_0001ENSG00000164741ENST00000276297ENST00000316609ENST00000358919ENST00000510318ENST00000520226ENSG00000250305ENST00000400069ENST00000524591ENST00000528335ENST00000528753ENST00000529706ENST00000529978ENSG00000251468ENST00000506173ENSG00000253257ENST00000523876ENSG00000253932ENST00000523495CIL_0003VG_0002ENSMUSG00000031523ENSMUST00000033923ENSMUST00000098826ENSMUST00000163663ENSMUST00000178717ENSMUSG00000039620ENSMUST00000125492ENSMUST00000135373ENSMUST00000147525ENSMUST00000152039ENSMUST00000171777
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164741 ENST00000276297 5.937±0.00 1.639±0.00 N/A 1.314±0.00 N/A 2.107±0.00 2.059±0.00 N/A 2.328±0.00 N/A 0.860±0.00 1.509±1.10 1.220±0.00 1.834±0.95
ENST00000316609 N/A N/A N/A 2.728±0.00 N/A 3.648±0.00 N/A N/A N/A N/A N/A 2.422±0.00 N/A N/A
ENST00000358919 N/A N/A N/A N/A N/A 1.846±0.00 1.973±0.00 N/A N/A N/A 1.256±0.33 N/A N/A N/A
ENST00000503161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510318 N/A N/A 3.376±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520226 N/A N/A N/A 1.603±0.00 3.349±0.00 N/A N/A N/A 2.910±0.00 6.838±0.00 2.660±0.00 N/A N/A N/A
ENST00000521730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250305 ENST00000400069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00 0.506±0.00 0.069±0.00 N/A
ENST00000447063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524591 N/A 0.361±0.00 N/A 0.285±0.00 0.185±0.09 0.427±0.23 N/A N/A N/A N/A N/A 0.177±0.00 0.012±0.00 0.141±0.00
ENST00000525249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528335 N/A N/A N/A N/A N/A N/A N/A 2.817±0.00 N/A N/A 1.758±0.00 N/A N/A N/A
ENST00000528753 N/A N/A N/A N/A N/A 1.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529706 N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A 0.105±0.00 0.162±0.00 0.513±0.00 N/A
ENST00000529978 0.176±0.00 0.553±0.00 N/A 0.612±0.31 0.321±0.14 N/A 1.161±0.26 0.660±0.00 0.091±0.00 0.480±0.05 0.048±0.01 0.119±0.07 0.074±0.00 0.592±0.00
ENST00000532376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251468 ENST00000506173 0.008±0.00 0.263±0.00 0.032±0.00 0.108±0.00 0.137±0.00 N/A 0.051±0.00 0.064±0.00 0.090±0.00 N/A N/A 0.027±0.01 0.030±0.01 0.159±0.03
ENSG00000253257 ENST00000523876 N/A N/A N/A N/A N/A N/A 5.785±0.00 N/A N/A N/A N/A N/A N/A 0.190±0.00
ENSG00000253932 ENST00000523495 0.012±0.00 0.037±0.00 0.260±0.00 0.072±0.05 0.040±0.00 0.082±0.08 0.064±0.04 0.023±0.02 N/A 0.036±0.00 0.013±0.00 0.025±0.01 0.015±0.00 0.067±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031523 ENSMUST00000033923 23.719±10.16 12.546±2.56 6.493±1.40 2.453±0.51 13.077±2.70 2.884±0.65 11.580±0.94 7.119±0.68 3.445±1.07 35.983±3.04 2.416±0.21 10.123±2.57 11.206±10.27 0.357±0.15
ENSMUST00000036104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000098826 N/A 2.711±0.13 N/A 1.016±0.00 N/A 0.996±0.11 N/A N/A 1.502±0.68 N/A 0.394±0.00 1.700±0.03 N/A N/A
ENSMUST00000145245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163663 4.590±1.16 N/A N/A N/A 2.704±0.48 0.966±0.33 2.762±0.45 1.370±0.03 N/A N/A 0.364±0.00 2.401±0.26 1.300±0.51 0.117±0.02
ENSMUST00000178717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00
ENSMUST00000179501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039620 ENSMUST00000125492 N/A N/A N/A 5.347±0.00 0.410±0.00 0.350±0.00 0.295±0.00 N/A 0.137±0.00 0.232±0.00 0.139±0.00 2.089±0.81 3.200±2.06 0.395±0.17
ENSMUST00000135373 0.826±0.26 0.988±0.20 0.790±0.02 0.198±0.00 1.171±0.33 0.403±0.13 0.203±0.05 0.772±0.27 0.660±0.46 0.313±0.17 0.102±0.05 0.913±0.34 0.748±0.37 0.353±0.00
ENSMUST00000147525 N/A 0.327±0.00 N/A 0.296±0.16 N/A 0.165±0.00 0.091±0.00 N/A 0.458±0.14 N/A 0.024±0.00 0.424±0.26 N/A 0.043±0.00
ENSMUST00000152039 N/A N/A N/A 5.800±0.00 N/A N/A 0.320±0.00 N/A N/A N/A 0.133±0.03 2.006±1.39 3.527±2.67 0.244±0.16
ENSMUST00000171777 0.383±0.09 N/A 1.185±0.06 0.799±0.09 N/A N/A 0.262±0.18 N/A 0.176±0.13 0.297±0.01 0.066±0.00 1.546±0.89 0.926±0.25 0.222±0.10

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