C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coronin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039637 Coro7 10090 - 16:4626133-4679777 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038552 Coro7-001 4626133-4679777 protein_coding
  ENSMUST00000090480 Coro7-003 4652566-4679777 protein_coding
  ENSMUST00000123031 Coro7-004 4660302-4679713 retained_intron
  ENSMUST00000127125 Coro7-007 4633324-4635041 retained_intron
  ENSMUST00000127850 Coro7-012 4675516-4679742 retained_intron
  ENSMUST00000130125 Coro7-006 4634598-4661922 retained_intron
  ENSMUST00000135823 Coro7-002 4629059-4679678 nonsense_mediated_decay
  ENSMUST00000139072 Coro7-008 4632246-4635035 retained_intron
  ENSMUST00000143723 Coro7-005 4633277-4646716 processed_transcript
  ENSMUST00000150028 Coro7-013 4627377-4628871 processed_transcript
  ENSMUST00000150724 Coro7-011 4628752-4629666 retained_intron
  ENSMUST00000151156 Coro7-010 4631878-4633859 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000038552ENSMUST00000150028
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000038552 13.217±0.90 14.293±0.52 10.322±0.16 12.874±3.23 21.979±8.14 10.241±3.30 4.659±1.10 13.988±0.54 6.827±0.83 15.025±1.97 13.164±4.25 10.508±3.90 4.304±1.14
ENSMUST00000150028 N/A N/A N/A 83.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009Y CIL_00009Y_0002 CGP 16:4616464-4679777
CIL_00009L CIL_00009L_0002 CGP 16:4626133-4679777

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005794 IDA Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0006895 ISS Golgi to endosome transport
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016021 IDA integral component of membrane
GO:0030041 ISS actin filament polymerization
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089616 coro7 coronin 7 protein_coding Danio_rerio
ENSG00000103426 CORO7-PAM16 CORO7-PAM16 readthrough protein_coding Homo_sapiens
ENSG00000262246 CORO7 coronin 7 protein_coding Homo_sapiens

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