C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coronin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000262246 CORO7 9606 - 16:4354542-4425705 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251166 CORO7-001 4354542-4416664 protein_coding
  ENST00000537233 CORO7-004 4354601-4416629 protein_coding
  ENST00000570645 CORO7-019 4388607-4416626 protein_coding
  ENST00000570779 CORO7-031 4355080-4358450 protein_coding
  ENST00000570928 CORO7-035 4395319-4416595 nonsense_mediated_decay
  ENST00000571052 CORO7-020 4388576-4416597 protein_coding
  ENST00000571059 CORO7-017 4388013-4416629 protein_coding
  ENST00000571227 CORO7-010 4354544-4416627 nonsense_mediated_decay
  ENST00000571756 CORO7-006 4361690-4416596 nonsense_mediated_decay
  ENST00000572026 CORO7-024 4407525-4415897 processed_transcript
  ENST00000572044 CORO7-021 4364830-4416596 protein_coding
  ENST00000572125 CORO7-033 4358850-4359624 retained_intron
  ENST00000572140 CORO7-013 4416725-4425523 processed_transcript
  ENST00000572153 CORO7-022 4405471-4416579 nonsense_mediated_decay
  ENST00000572518 CORO7-027 4408186-4412936 processed_transcript
  ENST00000572549 CORO7-016 4364652-4416929 protein_coding
  ENST00000572666 CORO7-029 4358442-4361902 retained_intron
  ENST00000572898 CORO7-018 4405510-4416627 protein_coding
  ENST00000573165 CORO7-012 4416461-4425705 protein_coding
  ENST00000573245 CORO7-032 4387765-4395340 retained_intron
  ENST00000573773 CORO7-028 4361650-4364571 retained_intron
  ENST00000574025 CORO7-009 4354964-4416627 protein_coding
  ENST00000574311 CORO7-005 4360278-4416596 nonsense_mediated_decay
  ENST00000574849 CORO7-034 4357764-4359328 retained_intron
  ENST00000575038 CORO7-014 4388582-4416930 protein_coding
  ENST00000575531 CORO7-011 4356432-4363228 retained_intron
  ENST00000575714 CORO7-003 4357375-4407577 retained_intron
  ENST00000575850 CORO7-015 4395323-4416929 protein_coding
  ENST00000576051 CORO7-026 4405523-4413489 protein_coding
  ENST00000576437 CORO7-008 4360445-4416626 nonsense_mediated_decay
  ENST00000576457 CORO7-025 4405544-4414426 processed_transcript
  ENST00000576637 CORO7-030 4354968-4359627 nonsense_mediated_decay
  ENST00000577144 CORO7-023 4405545-4415933 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251166ENST00000537233ENST00000570645ENST00000571052ENST00000571756ENST00000572549ENST00000572666ENST00000574025ENST00000575038ENST00000575714ENST00000576637
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251166 4.737±0.00 20.159±0.00 N/A 11.555±0.00 2.375±1.77 N/A 2.431±0.00 4.520±0.00 1.137±0.98 21.986±0.00 2.716±0.00 9.647±0.58 13.677±3.99 13.067±1.11
ENST00000537233 2.047±0.00 N/A N/A 1.289±0.00 2.523±0.00 2.867±0.00 N/A 5.354±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570645 N/A N/A N/A N/A N/A N/A N/A N/A 1.281±0.00 N/A N/A N/A N/A N/A
ENST00000571052 N/A N/A N/A N/A N/A N/A N/A 3.184±0.00 N/A N/A N/A N/A N/A N/A
ENST00000571756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A
ENST00000572549 N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572666 N/A N/A 0.319±0.00 N/A 0.665±0.00 N/A N/A 1.030±0.00 0.765±0.00 N/A N/A N/A N/A N/A
ENST00000574025 N/A N/A N/A 0.916±0.00 N/A 0.895±0.00 0.376±0.00 N/A N/A 1.042±0.00 N/A 0.867±0.00 N/A N/A
ENST00000575038 N/A N/A 0.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575714 N/A N/A N/A N/A 0.387±0.00 1.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576637 8.696±0.00 54.091±0.00 N/A 23.656±0.00 10.958±0.00 6.682±0.00 N/A N/A N/A N/A N/A N/A 12.946±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009U CIL_00009U_0001 CGP 16:4314761-4355607
CIL_00009Y CIL_00009Y_0001 CGP 16:4331549-4420494
CIL_00009L CIL_00009L_0001 CGP 16:4354542-4425705

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI:IEA protein binding
GO:0005794 ISS Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0006895 IMP Golgi to endosome transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 ISS integral component of membrane
GO:0030041 IMP actin filament polymerization
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089616 coro7 coronin 7 protein_coding Danio_rerio
ENSMUSG00000039637 Coro7 coronin 7 protein_coding Mus_musculus

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