C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038552 Coro7-001 ENSMUSG00000039637 10090 - 16:4626133-4679777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000038552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000038552 13.217±0.90 14.293±0.52 10.322±0.16 12.874±3.23 21.979±8.14 10.241±3.30 4.659±1.10 13.988±0.54 6.827±0.83 15.025±1.97 13.164±4.25 10.508±3.90 4.304±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009Y CIL_00009Y_0002 CGP 16:4616464-4679777
CIL_00009L CIL_00009L_0002 CGP 16:4626133-4679777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005794 IDA Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0006895 ISS Golgi to endosome transport
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016021 IDA integral component of membrane
GO:0030041 ISS actin filament polymerization
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251166 CORO7-001 protein_coding Homo_sapiens 0 2444
ENST00000537233 CORO7-004 protein_coding Homo_sapiens 0 2189
ENST00000570645 CORO7-019 protein_coding Homo_sapiens 0 329
ENST00000570928 CORO7-035 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000571052 CORO7-020 protein_coding Homo_sapiens 0 414
ENST00000571059 CORO7-017 protein_coding Homo_sapiens 0 289
ENST00000571227 CORO7-010 nonsense_mediated_decay Homo_sapiens 0 2013
ENST00000571756 CORO7-006 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000572026 CORO7-024 processed_transcript Homo_sapiens 0 340
ENST00000572125 CORO7-033 retained_intron Homo_sapiens 0 204
ENST00000572153 CORO7-022 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000572274 CORO7-PAM16-003 processed_transcript Homo_sapiens 0 468
ENST00000572467 CORO7-PAM16-001 protein_coding Homo_sapiens 0 2425
ENST00000572666 CORO7-029 retained_intron Homo_sapiens 0 708
ENST00000572898 CORO7-018 protein_coding Homo_sapiens 0 355
ENST00000574025 CORO7-009 protein_coding Homo_sapiens 0 2015
ENST00000575038 CORO7-014 protein_coding Homo_sapiens 0 355
ENST00000575334 CORO7-PAM16-002 nonsense_mediated_decay Homo_sapiens 0 1354
ENST00000575531 CORO7-011 retained_intron Homo_sapiens 0 1249
ENST00000575714 CORO7-003 retained_intron Homo_sapiens 0 1688
ENST00000575850 CORO7-015 protein_coding Homo_sapiens 0 462
ENST00000576051 CORO7-026 protein_coding Homo_sapiens 0 411
ENST00000576437 CORO7-008 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000576457 CORO7-025 processed_transcript Homo_sapiens 0 388
ENST00000576637 CORO7-030 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000577144 CORO7-023 processed_transcript Homo_sapiens 0 387
ENST00000614702 CORO7-PAM16-201 protein_coding Homo_sapiens 0 2444
ENST00000617235 CORO7-PAM16-203 protein_coding Homo_sapiens 0 2015
ENST00000617295 CORO7-PAM16-204 protein_coding Homo_sapiens 0 2425

Loading