C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vasorin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039646 Vasn 10090 + 16:4639941-4650802 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038770 Vasn-001 4639941-4650802 protein_coding
  ENSMUST00000138044 Vasn-002 4639968-4647559 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000038770
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000038770 17.972±2.36 15.041±1.50 16.663±1.22 4.489±0.00 27.634±10.07 10.541±0.20 8.997±1.15 16.416±2.34 6.632±2.00 40.223±5.85 36.948±12.52 10.912±4.11 7.516±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009Y CIL_00009Y_0002 CGP 16:4616464-4679777
CIL_00009L CIL_00009L_0002 CGP 16:4626133-4679777
CIL_000003 CIL_000003_0003 CGP 16:4639941-4707695

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005739 IDA mitochondrion
GO:0005765 IEA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0009986 IEA cell surface
GO:0010719 IEA negative regulation of epithelial to mesenchymal transition
GO:0016021 IEA integral component of membrane
GO:0030512 IEA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0050431 IEA transforming growth factor beta binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071456 IMP cellular response to hypoxia
GO:0071461 IMP cellular response to redox state

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016293 vasnb vasorin b protein_coding Danio_rerio
ENSDARG00000076215 vasna vasorin a protein_coding Danio_rerio
ENSG00000168140 VASN vasorin protein_coding Homo_sapiens

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