C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000003_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076215-ENSDARG00000095983 CGP 7955 22:26364959-26624462
GeneTranscriptPositionBiotype
ENSDARG00000076215 (vasna)
vasorin a 		ENSDART00000113785 (vasna-201) 26364959-26520071 protein_coding
ENSDART00000124315 (vasna-001) 26364959-26395963 protein_coding
ENSDARG00000095983 (dnaja3b)
DnaJ (Hsp40) homolog, subfamily A, member 3B 		ENSDART00000105122 (dnaja3b-201) 26481855-26624462 protein_coding
ENSDART00000122921 (dnaja3b-202) 26612602-26624462 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000003_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168140-ENSG00000103423 CGP 9606 16:4371848-4456775
GeneTranscriptPositionBiotype
ENSG00000103423 (DNAJA3)
DnaJ (Hsp40) homolog, subfamily A, member 3 		ENST00000262375 (DNAJA3-001) 4425805-4456775 protein_coding
ENST00000355296 (DNAJA3-002) 4425860-4456775 protein_coding
ENST00000431375 (DNAJA3-201) 4425805-4456772 protein_coding
ENST00000570857 (DNAJA3-007) 4425865-4442308 nonsense_mediated_decay
ENST00000572009 (DNAJA3-011) 4434298-4441401 retained_intron
ENST00000572139 (DNAJA3-010) 4433846-4441477 processed_transcript
ENST00000572974 (DNAJA3-008) 4425868-4431868 processed_transcript
ENST00000573120 (DNAJA3-013) 4426048-4437625 retained_intron
ENST00000574393 (DNAJA3-012) 4455492-4456775 processed_transcript
ENST00000574895 (DNAJA3-009) 4425879-4442393 protein_coding
ENST00000575106 (DNAJA3-006) 4425865-4442383 nonsense_mediated_decay
ENST00000576180 (DNAJA3-004) 4449554-4456772 retained_intron
ENST00000576911 (DNAJA3-003) 4425865-4455951 nonsense_mediated_decay
ENST00000577083 (DNAJA3-005) 4440257-4447955 retained_intron
ENSG00000103426 (CORO7-PAM16)
CORO7-PAM16 readthrough 		ENST00000572274 (CORO7-PAM16-003) 4340941-4359353 processed_transcript
ENST00000572467 (CORO7-PAM16-001) 4340251-4416587 protein_coding
ENST00000575334 (CORO7-PAM16-002) 4340251-4420494 nonsense_mediated_decay
ENSG00000168140 (VASN)
vasorin 		ENST00000304735 (VASN-001) 4371848-4383528 protein_coding
ENSG00000262246 (CORO7)
coronin 7 		ENST00000251166 (CORO7-001) 4354542-4416664 protein_coding
ENST00000537233 (CORO7-004) 4354601-4416629 protein_coding
ENST00000570645 (CORO7-019) 4388607-4416626 protein_coding
ENST00000570779 (CORO7-031) 4355080-4358450 protein_coding
ENST00000570928 (CORO7-035) 4395319-4416595 nonsense_mediated_decay
ENST00000571052 (CORO7-020) 4388576-4416597 protein_coding
ENST00000571059 (CORO7-017) 4388013-4416629 protein_coding
ENST00000571227 (CORO7-010) 4354544-4416627 nonsense_mediated_decay
ENST00000571756 (CORO7-006) 4361690-4416596 nonsense_mediated_decay
ENST00000572026 (CORO7-024) 4407525-4415897 processed_transcript
ENST00000572044 (CORO7-021) 4364830-4416596 protein_coding
ENST00000572125 (CORO7-033) 4358850-4359624 retained_intron
ENST00000572140 (CORO7-013) 4416725-4425523 processed_transcript
ENST00000572153 (CORO7-022) 4405471-4416579 nonsense_mediated_decay
ENST00000572518 (CORO7-027) 4408186-4412936 processed_transcript
ENST00000572549 (CORO7-016) 4364652-4416929 protein_coding
ENST00000572666 (CORO7-029) 4358442-4361902 retained_intron
ENST00000572898 (CORO7-018) 4405510-4416627 protein_coding
ENST00000573165 (CORO7-012) 4416461-4425705 protein_coding
ENST00000573245 (CORO7-032) 4387765-4395340 retained_intron
ENST00000573773 (CORO7-028) 4361650-4364571 retained_intron
ENST00000574025 (CORO7-009) 4354964-4416627 protein_coding
ENST00000574311 (CORO7-005) 4360278-4416596 nonsense_mediated_decay
ENST00000574849 (CORO7-034) 4357764-4359328 retained_intron
ENST00000575038 (CORO7-014) 4388582-4416930 protein_coding
ENST00000575531 (CORO7-011) 4356432-4363228 retained_intron
ENST00000575714 (CORO7-003) 4357375-4407577 retained_intron
ENST00000575850 (CORO7-015) 4395323-4416929 protein_coding
ENST00000576051 (CORO7-026) 4405523-4413489 protein_coding
ENST00000576437 (CORO7-008) 4360445-4416626 nonsense_mediated_decay
ENST00000576457 (CORO7-025) 4405544-4414426 processed_transcript
ENST00000576637 (CORO7-030) 4354968-4359627 nonsense_mediated_decay
ENST00000577144 (CORO7-023) 4405545-4415933 processed_transcript
ENSG00000275515 (RP11-295D4.7)
 ENST00000619258 (RP11-295D4.7-001) 4433202-4433387 processed_pseudogene
ENSG00000277170 (RP11-295D4.4)
 ENST00000614983 (RP11-295D4.4-001) 4426902-4427380 sense_intronic
ENSG00000277440 (RP11-295D4.5)
 ENST00000616838 (RP11-295D4.5-001) 4430522-4431103 sense_intronic

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000003_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039646-ENSMUSG00000004069 CGP 10090 16:4639941-4707695
GeneTranscriptPositionBiotype
ENSMUSG00000004069 (Dnaja3)
DnaJ (Hsp40) homolog, subfamily A, member 3 		ENSMUST00000060067 (Dnaja3-001) 4684070-4707695 protein_coding
ENSMUST00000115854 (Dnaja3-002) 4684096-4707695 protein_coding
ENSMUST00000138495 (Dnaja3-003) 4684114-4694245 retained_intron
ENSMUST00000144815 (Dnaja3-004) 4639989-4687292 processed_transcript
ENSMUSG00000039637 (Coro7)
coronin 7 		ENSMUST00000038552 (Coro7-001) 4626133-4679777 protein_coding
ENSMUST00000090480 (Coro7-003) 4652566-4679777 protein_coding
ENSMUST00000123031 (Coro7-004) 4660302-4679713 retained_intron
ENSMUST00000127125 (Coro7-007) 4633324-4635041 retained_intron
ENSMUST00000127850 (Coro7-012) 4675516-4679742 retained_intron
ENSMUST00000130125 (Coro7-006) 4634598-4661922 retained_intron
ENSMUST00000135823 (Coro7-002) 4629059-4679678 nonsense_mediated_decay
ENSMUST00000139072 (Coro7-008) 4632246-4635035 retained_intron
ENSMUST00000143723 (Coro7-005) 4633277-4646716 processed_transcript
ENSMUST00000150028 (Coro7-013) 4627377-4628871 processed_transcript
ENSMUST00000150724 (Coro7-011) 4628752-4629666 retained_intron
ENSMUST00000151156 (Coro7-010) 4631878-4633859 retained_intron
ENSMUSG00000039646 (Vasn)
vasorin 		ENSMUST00000038770 (Vasn-001) 4639941-4650802 protein_coding
ENSMUST00000138044 (Vasn-002) 4639968-4647559 processed_transcript

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000003_0001ENSDARG00000076215ENSDART00000113785ENSDART00000124315ENSDARG00000095983ENSDART00000105122ENSDART00000122921CIL_000003_0002ENSG00000103423ENST00000262375ENST00000355296ENST00000431375ENST00000570857ENST00000572009ENST00000572139ENST00000572974ENST00000573120ENST00000574393ENST00000574895ENST00000575106ENST00000576180ENST00000576911ENST00000577083ENSG00000103426ENST00000572274ENST00000572467ENST00000575334ENSG00000168140ENST00000304735ENSG00000262246ENST00000251166ENST00000537233ENST00000570645ENST00000570779ENST00000570928ENST00000571052ENST00000571059ENST00000571227ENST00000571756ENST00000572026ENST00000572044ENST00000572125ENST00000572140ENST00000572153ENST00000572518ENST00000572549ENST00000572666ENST00000572898ENST00000573165ENST00000573245ENST00000573773ENST00000574025ENST00000574311ENST00000574849ENST00000575038ENST00000575531ENST00000575714ENST00000575850ENST00000576051ENST00000576437ENST00000576457ENST00000576637ENST00000577144ENSG00000275515ENST00000619258ENSG00000277170ENST00000614983ENSG00000277440ENST00000616838CIL_000003_0003ENSMUSG00000004069ENSMUST00000060067ENSMUST00000115854ENSMUST00000138495ENSMUST00000144815ENSMUSG00000039637ENSMUST00000038552ENSMUST00000090480ENSMUST00000123031ENSMUST00000127125ENSMUST00000127850ENSMUST00000130125ENSMUST00000135823ENSMUST00000139072ENSMUST00000143723ENSMUST00000150028ENSMUST00000150724ENSMUST00000151156ENSMUSG00000039646ENSMUST00000038770ENSMUST00000138044
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000003_0001ENSDARG00000076215ENSDART00000113785ENSDART00000124315ENSDARG00000095983ENSDART00000105122ENSDART00000122921CIL_000003_0002ENSG00000103423ENST00000262375ENST00000355296ENST00000431375ENST00000575106ENST00000576180ENST00000576911ENSG00000103426ENST00000572274ENSG00000168140ENST00000304735ENSG00000262246ENST00000251166ENST00000537233ENST00000570645ENST00000571052ENST00000571756ENST00000572549ENST00000572666ENST00000574025ENST00000575038ENST00000575714ENST00000576637ENSG00000275515ENST00000619258ENSG00000277170ENST00000614983ENSG00000277440ENST00000616838CIL_000003_0003ENSMUSG00000004069ENSMUST00000060067ENSMUST00000115854ENSMUST00000138495ENSMUSG00000039637ENSMUST00000038552ENSMUST00000150028ENSMUSG00000039646ENSMUST00000038770
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076215 ENSDART00000113785 N/A N/A N/A 0.474±0.10 N/A N/A 0.661±0.23 0.490±0.18 0.026±0.00 N/A 3.152±0.00 N/A N/A N/A
ENSDART00000124315 N/A N/A N/A 0.863±0.36 N/A N/A 0.549±0.00 2.823±0.34 N/A N/A 2.090±0.00 N/A N/A N/A
ENSDARG00000095983 ENSDART00000105122 N/A N/A N/A 2.214±0.90 N/A N/A 2.055±1.21 1.012±0.00 0.090±0.00 N/A 0.632±0.00 N/A N/A N/A
ENSDART00000122921 N/A N/A N/A 2.849±1.29 N/A N/A 4.980±3.88 2.887±0.82 0.059±0.00 N/A 0.838±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103423 ENST00000262375 1.681±0.00 N/A N/A 2.749±0.53 2.932±0.00 3.061±0.31 3.310±2.50 5.693±1.67 4.669±3.40 1.556±0.31 12.044±0.00 3.628±0.94 3.327±0.06 5.563±0.00
ENST00000355296 4.022±0.00 5.010±0.00 0.735±0.00 3.179±0.71 3.624±0.49 2.071±0.14 8.477±5.46 3.629±1.61 6.603±4.85 4.402±0.00 10.200±5.82 8.100±3.96 9.318±5.61 4.767±1.54
ENST00000431375 N/A 4.564±0.00 N/A 4.897±0.00 N/A 4.312±0.00 N/A 4.019±0.00 10.260±0.00 2.391±0.00 8.582±0.00 5.564±0.52 N/A 4.215±0.13
ENST00000570857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.645±0.00 N/A N/A
ENST00000576180 N/A 2.368±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576911 4.308±0.00 5.375±0.00 N/A 8.518±0.00 3.885±2.35 3.983±0.00 1.401±0.00 4.737±2.87 1.506±0.00 2.033±0.00 9.348±0.00 9.873±0.00 11.016±0.00 9.314±2.95
ENST00000577083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103426 ENST00000572274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.424±0.00 N/A N/A
ENST00000572467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168140 ENST00000304735 17.578±0.00 N/A 2.254±0.00 7.344±6.12 5.986±3.74 4.378±3.92 1.296±0.80 11.848±10.06 4.907±2.89 19.373±17.30 2.569±0.02 25.228±12.96 56.036±5.28 15.414±2.00
ENSG00000262246 ENST00000251166 4.737±0.00 20.159±0.00 N/A 11.555±0.00 2.375±1.77 N/A 2.431±0.00 4.520±0.00 1.137±0.98 21.986±0.00 2.716±0.00 9.647±0.58 13.677±3.99 13.067±1.11
ENST00000537233 2.047±0.00 N/A N/A 1.289±0.00 2.523±0.00 2.867±0.00 N/A 5.354±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570645 N/A N/A N/A N/A N/A N/A N/A N/A 1.281±0.00 N/A N/A N/A N/A N/A
ENST00000570779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571052 N/A N/A N/A N/A N/A N/A N/A 3.184±0.00 N/A N/A N/A N/A N/A N/A
ENST00000571059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A
ENST00000572026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572549 N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572666 N/A N/A 0.319±0.00 N/A 0.665±0.00 N/A N/A 1.030±0.00 0.765±0.00 N/A N/A N/A N/A N/A
ENST00000572898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574025 N/A N/A N/A 0.916±0.00 N/A 0.895±0.00 0.376±0.00 N/A N/A 1.042±0.00 N/A 0.867±0.00 N/A N/A
ENST00000574311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575038 N/A N/A 0.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575714 N/A N/A N/A N/A 0.387±0.00 1.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576637 8.696±0.00 54.091±0.00 N/A 23.656±0.00 10.958±0.00 6.682±0.00 N/A N/A N/A N/A N/A N/A 12.946±0.00 N/A
ENST00000577144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275515 ENST00000619258 N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 0.080±0.00 N/A N/A 1.151±0.06 0.593±0.00 0.450±0.03
ENSG00000277170 ENST00000614983 0.176±0.00 0.678±0.00 0.719±0.00 0.506±0.17 0.461±0.13 0.093±0.00 0.770±0.71 N/A 0.059±0.00 0.197±0.14 N/A 0.446±0.31 0.133±0.00 0.282±0.25
ENSG00000277440 ENST00000616838 0.067±0.00 0.907±0.00 N/A 0.083±0.01 0.145±0.04 0.137±0.12 0.246±0.14 0.661±0.00 0.059±0.00 0.251±0.17 0.222±0.00 0.261±0.12 N/A 0.249±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004069 ENSMUST00000060067 N/A N/A N/A N/A N/A N/A 7.464±0.76 N/A 4.933±0.66 N/A 10.449±1.10 5.844±0.14 8.724±0.00 N/A
ENSMUST00000115854 23.197±2.75 30.064±3.75 17.174±0.41 17.745±5.57 23.757±1.05 16.596±1.19 34.880±3.90 34.506±2.03 22.335±3.76 14.124±0.43 32.187±1.27 21.320±3.85 23.161±13.24 15.771±1.42
ENSMUST00000138495 N/A 42.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039637 ENSMUST00000038552 13.217±0.90 14.293±0.52 10.322±0.16 12.874±3.23 21.979±8.14 10.241±3.30 4.659±1.10 13.988±0.54 6.827±0.83 15.025±1.97 N/A 13.164±4.25 10.508±3.90 4.304±1.14
ENSMUST00000090480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150028 N/A N/A N/A 83.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039646 ENSMUST00000038770 17.972±2.36 15.041±1.50 16.663±1.22 4.489±0.00 27.634±10.07 10.541±0.20 8.997±1.15 16.416±2.34 6.632±2.00 40.223±5.85 N/A 36.948±12.52 10.912±4.11 7.516±0.34
ENSMUST00000138044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading