C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000003_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076215-ENSDARG00000095983 CGP 7955 22:26364959-26624462
GeneTranscriptPositionBiotype
ENSDARG00000076215 (vasna)
vasorin a 		ENSDART00000113785 (vasna-201) 26364959-26520071 protein_coding
ENSDART00000124315 (vasna-001) 26364959-26395963 protein_coding
ENSDARG00000095983 (dnaja3b)
DnaJ (Hsp40) homolog, subfamily A, member 3B 		ENSDART00000105122 (dnaja3b-201) 26481855-26624462 protein_coding
ENSDART00000122921 (dnaja3b-202) 26612602-26624462 protein_coding
CIL_000003_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168140-ENSG00000103423 CGP 9606 16:4371848-4456775
GeneTranscriptPositionBiotype
ENSG00000103423 (DNAJA3)
DnaJ (Hsp40) homolog, subfamily A, member 3 		ENST00000262375 (DNAJA3-001) 4425805-4456775 protein_coding
ENST00000355296 (DNAJA3-002) 4425860-4456775 protein_coding
ENST00000431375 (DNAJA3-201) 4425805-4456772 protein_coding
ENST00000570857 (DNAJA3-007) 4425865-4442308 nonsense_mediated_decay
ENST00000572009 (DNAJA3-011) 4434298-4441401 retained_intron
ENST00000572139 (DNAJA3-010) 4433846-4441477 processed_transcript
ENST00000572974 (DNAJA3-008) 4425868-4431868 processed_transcript
ENST00000573120 (DNAJA3-013) 4426048-4437625 retained_intron
ENST00000574393 (DNAJA3-012) 4455492-4456775 processed_transcript
ENST00000574895 (DNAJA3-009) 4425879-4442393 protein_coding
ENST00000575106 (DNAJA3-006) 4425865-4442383 nonsense_mediated_decay
ENST00000576180 (DNAJA3-004) 4449554-4456772 retained_intron
ENST00000576911 (DNAJA3-003) 4425865-4455951 nonsense_mediated_decay
ENST00000577083 (DNAJA3-005) 4440257-4447955 retained_intron
ENSG00000103426 (CORO7-PAM16)
CORO7-PAM16 readthrough 		ENST00000572274 (CORO7-PAM16-003) 4340941-4359353 processed_transcript
ENST00000572467 (CORO7-PAM16-001) 4340251-4416587 protein_coding
ENST00000575334 (CORO7-PAM16-002) 4340251-4420494 nonsense_mediated_decay
ENSG00000168140 (VASN)
vasorin 		ENST00000304735 (VASN-001) 4371848-4383528 protein_coding
ENSG00000262246 (CORO7)
coronin 7 		ENST00000251166 (CORO7-001) 4354542-4416664 protein_coding
ENST00000537233 (CORO7-004) 4354601-4416629 protein_coding
ENST00000570645 (CORO7-019) 4388607-4416626 protein_coding
ENST00000570779 (CORO7-031) 4355080-4358450 protein_coding
ENST00000570928 (CORO7-035) 4395319-4416595 nonsense_mediated_decay
ENST00000571052 (CORO7-020) 4388576-4416597 protein_coding
ENST00000571059 (CORO7-017) 4388013-4416629 protein_coding
ENST00000571227 (CORO7-010) 4354544-4416627 nonsense_mediated_decay
ENST00000571756 (CORO7-006) 4361690-4416596 nonsense_mediated_decay
ENST00000572026 (CORO7-024) 4407525-4415897 processed_transcript
ENST00000572044 (CORO7-021) 4364830-4416596 protein_coding
ENST00000572125 (CORO7-033) 4358850-4359624 retained_intron
ENST00000572140 (CORO7-013) 4416725-4425523 processed_transcript
ENST00000572153 (CORO7-022) 4405471-4416579 nonsense_mediated_decay
ENST00000572518 (CORO7-027) 4408186-4412936 processed_transcript
ENST00000572549 (CORO7-016) 4364652-4416929 protein_coding
ENST00000572666 (CORO7-029) 4358442-4361902 retained_intron
ENST00000572898 (CORO7-018) 4405510-4416627 protein_coding
ENST00000573165 (CORO7-012) 4416461-4425705 protein_coding
ENST00000573245 (CORO7-032) 4387765-4395340 retained_intron
ENST00000573773 (CORO7-028) 4361650-4364571 retained_intron
ENST00000574025 (CORO7-009) 4354964-4416627 protein_coding
ENST00000574311 (CORO7-005) 4360278-4416596 nonsense_mediated_decay
ENST00000574849 (CORO7-034) 4357764-4359328 retained_intron
ENST00000575038 (CORO7-014) 4388582-4416930 protein_coding
ENST00000575531 (CORO7-011) 4356432-4363228 retained_intron
ENST00000575714 (CORO7-003) 4357375-4407577 retained_intron
ENST00000575850 (CORO7-015) 4395323-4416929 protein_coding
ENST00000576051 (CORO7-026) 4405523-4413489 protein_coding
ENST00000576437 (CORO7-008) 4360445-4416626 nonsense_mediated_decay
ENST00000576457 (CORO7-025) 4405544-4414426 processed_transcript
ENST00000576637 (CORO7-030) 4354968-4359627 nonsense_mediated_decay
ENST00000577144 (CORO7-023) 4405545-4415933 processed_transcript
ENSG00000275515 (RP11-295D4.7)
 ENST00000619258 (RP11-295D4.7-001) 4433202-4433387 processed_pseudogene
ENSG00000277170 (RP11-295D4.4)
 ENST00000614983 (RP11-295D4.4-001) 4426902-4427380 sense_intronic
ENSG00000277440 (RP11-295D4.5)
 ENST00000616838 (RP11-295D4.5-001) 4430522-4431103 sense_intronic
CIL_000003_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039646-ENSMUSG00000004069 CGP 10090 16:4639941-4707695
GeneTranscriptPositionBiotype
ENSMUSG00000004069 (Dnaja3)
DnaJ (Hsp40) homolog, subfamily A, member 3 		ENSMUST00000060067 (Dnaja3-001) 4684070-4707695 protein_coding
ENSMUST00000115854 (Dnaja3-002) 4684096-4707695 protein_coding
ENSMUST00000138495 (Dnaja3-003) 4684114-4694245 retained_intron
ENSMUST00000144815 (Dnaja3-004) 4639989-4687292 processed_transcript
ENSMUSG00000039637 (Coro7)
coronin 7 		ENSMUST00000038552 (Coro7-001) 4626133-4679777 protein_coding
ENSMUST00000090480 (Coro7-003) 4652566-4679777 protein_coding
ENSMUST00000123031 (Coro7-004) 4660302-4679713 retained_intron
ENSMUST00000127125 (Coro7-007) 4633324-4635041 retained_intron
ENSMUST00000127850 (Coro7-012) 4675516-4679742 retained_intron
ENSMUST00000130125 (Coro7-006) 4634598-4661922 retained_intron
ENSMUST00000135823 (Coro7-002) 4629059-4679678 nonsense_mediated_decay
ENSMUST00000139072 (Coro7-008) 4632246-4635035 retained_intron
ENSMUST00000143723 (Coro7-005) 4633277-4646716 processed_transcript
ENSMUST00000150028 (Coro7-013) 4627377-4628871 processed_transcript
ENSMUST00000150724 (Coro7-011) 4628752-4629666 retained_intron
ENSMUST00000151156 (Coro7-010) 4631878-4633859 retained_intron
ENSMUSG00000039646 (Vasn)
vasorin 		ENSMUST00000038770 (Vasn-001) 4639941-4650802 protein_coding
ENSMUST00000138044 (Vasn-002) 4639968-4647559 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000003_0001ENSDARG00000076215ENSDART00000113785ENSDART00000124315ENSDARG00000095983ENSDART00000105122ENSDART00000122921CIL_000003_0002ENSG00000103423ENST00000262375ENST00000355296ENST00000431375ENST00000570857ENST00000572009ENST00000572139ENST00000572974ENST00000573120ENST00000574393ENST00000574895ENST00000575106ENST00000576180ENST00000576911ENST00000577083ENSG00000103426ENST00000572274ENST00000572467ENST00000575334ENSG00000168140ENST00000304735ENSG00000262246ENST00000251166ENST00000537233ENST00000570645ENST00000570779ENST00000570928ENST00000571052ENST00000571059ENST00000571227ENST00000571756ENST00000572026ENST00000572044ENST00000572125ENST00000572140ENST00000572153ENST00000572518ENST00000572549ENST00000572666ENST00000572898ENST00000573165ENST00000573245ENST00000573773ENST00000574025ENST00000574311ENST00000574849ENST00000575038ENST00000575531ENST00000575714ENST00000575850ENST00000576051ENST00000576437ENST00000576457ENST00000576637ENST00000577144ENSG00000275515ENST00000619258ENSG00000277170ENST00000614983ENSG00000277440ENST00000616838CIL_000003_0003ENSMUSG00000004069ENSMUST00000060067ENSMUST00000115854ENSMUST00000138495ENSMUST00000144815ENSMUSG00000039637ENSMUST00000038552ENSMUST00000090480ENSMUST00000123031ENSMUST00000127125ENSMUST00000127850ENSMUST00000130125ENSMUST00000135823ENSMUST00000139072ENSMUST00000143723ENSMUST00000150028ENSMUST00000150724ENSMUST00000151156ENSMUSG00000039646ENSMUST00000038770ENSMUST00000138044
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000003_0001ENSDARG00000076215ENSDART00000113785ENSDART00000124315ENSDARG00000095983ENSDART00000105122ENSDART00000122921CIL_000003_0002ENSG00000103423ENST00000262375ENST00000355296ENST00000431375ENST00000575106ENST00000576180ENST00000576911ENSG00000103426ENST00000572274ENSG00000168140ENST00000304735ENSG00000262246ENST00000251166ENST00000537233ENST00000570645ENST00000571052ENST00000571756ENST00000572549ENST00000572666ENST00000574025ENST00000575038ENST00000575714ENST00000576637ENSG00000275515ENST00000619258ENSG00000277170ENST00000614983ENSG00000277440ENST00000616838CIL_000003_0003ENSMUSG00000004069ENSMUST00000060067ENSMUST00000115854ENSMUST00000138495ENSMUSG00000039637ENSMUST00000038552ENSMUST00000150028ENSMUSG00000039646ENSMUST00000038770
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076215 ENSDART00000113785 N/A N/A N/A 0.474±0.10 N/A N/A 0.661±0.23 0.490±0.18 0.026±0.00 N/A 3.152±0.00 N/A N/A N/A
ENSDART00000124315 N/A N/A N/A 0.863±0.36 N/A N/A 0.549±0.00 2.823±0.34 N/A N/A 2.090±0.00 N/A N/A N/A
ENSDARG00000095983 ENSDART00000105122 N/A N/A N/A 2.214±0.90 N/A N/A 2.055±1.21 1.012±0.00 0.090±0.00 N/A 0.632±0.00 N/A N/A N/A
ENSDART00000122921 N/A N/A N/A 2.849±1.29 N/A N/A 4.980±3.88 2.887±0.82 0.059±0.00 N/A 0.838±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103423 ENST00000262375 1.681±0.00 N/A N/A 2.749±0.53 2.932±0.00 3.061±0.31 3.310±2.50 5.693±1.67 4.669±3.40 1.556±0.31 12.044±0.00 3.628±0.94 3.327±0.06 5.563±0.00
ENST00000355296 4.022±0.00 5.010±0.00 0.735±0.00 3.179±0.71 3.624±0.49 2.071±0.14 8.477±5.46 3.629±1.61 6.603±4.85 4.402±0.00 10.200±5.82 8.100±3.96 9.318±5.61 4.767±1.54
ENST00000431375 N/A 4.564±0.00 N/A 4.897±0.00 N/A 4.312±0.00 N/A 4.019±0.00 10.260±0.00 2.391±0.00 8.582±0.00 5.564±0.52 N/A 4.215±0.13
ENST00000570857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.645±0.00 N/A N/A
ENST00000576180 N/A 2.368±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576911 4.308±0.00 5.375±0.00 N/A 8.518±0.00 3.885±2.35 3.983±0.00 1.401±0.00 4.737±2.87 1.506±0.00 2.033±0.00 9.348±0.00 9.873±0.00 11.016±0.00 9.314±2.95
ENST00000577083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103426 ENST00000572274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.424±0.00 N/A N/A
ENST00000572467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168140 ENST00000304735 17.578±0.00 N/A 2.254±0.00 7.344±6.12 5.986±3.74 4.378±3.92 1.296±0.80 11.848±10.06 4.907±2.89 19.373±17.30 2.569±0.02 25.228±12.96 56.036±5.28 15.414±2.00
ENSG00000262246 ENST00000251166 4.737±0.00 20.159±0.00 N/A 11.555±0.00 2.375±1.77 N/A 2.431±0.00 4.520±0.00 1.137±0.98 21.986±0.00 2.716±0.00 9.647±0.58 13.677±3.99 13.067±1.11
ENST00000537233 2.047±0.00 N/A N/A 1.289±0.00 2.523±0.00 2.867±0.00 N/A 5.354±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570645 N/A N/A N/A N/A N/A N/A N/A N/A 1.281±0.00 N/A N/A N/A N/A N/A
ENST00000570779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571052 N/A N/A N/A N/A N/A N/A N/A 3.184±0.00 N/A N/A N/A N/A N/A N/A
ENST00000571059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A
ENST00000572026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572549 N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572666 N/A N/A 0.319±0.00 N/A 0.665±0.00 N/A N/A 1.030±0.00 0.765±0.00 N/A N/A N/A N/A N/A
ENST00000572898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574025 N/A N/A N/A 0.916±0.00 N/A 0.895±0.00 0.376±0.00 N/A N/A 1.042±0.00 N/A 0.867±0.00 N/A N/A
ENST00000574311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575038 N/A N/A 0.491±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575714 N/A N/A N/A N/A 0.387±0.00 1.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576637 8.696±0.00 54.091±0.00 N/A 23.656±0.00 10.958±0.00 6.682±0.00 N/A N/A N/A N/A N/A N/A 12.946±0.00 N/A
ENST00000577144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275515 ENST00000619258 N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 0.080±0.00 N/A N/A 1.151±0.06 0.593±0.00 0.450±0.03
ENSG00000277170 ENST00000614983 0.176±0.00 0.678±0.00 0.719±0.00 0.506±0.17 0.461±0.13 0.093±0.00 0.770±0.71 N/A 0.059±0.00 0.197±0.14 N/A 0.446±0.31 0.133±0.00 0.282±0.25
ENSG00000277440 ENST00000616838 0.067±0.00 0.907±0.00 N/A 0.083±0.01 0.145±0.04 0.137±0.12 0.246±0.14 0.661±0.00 0.059±0.00 0.251±0.17 0.222±0.00 0.261±0.12 N/A 0.249±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004069 ENSMUST00000060067 N/A N/A N/A N/A N/A N/A 7.464±0.76 N/A 4.933±0.66 N/A 10.449±1.10 5.844±0.14 8.724±0.00 N/A
ENSMUST00000115854 23.197±2.75 30.064±3.75 17.174±0.41 17.745±5.57 23.757±1.05 16.596±1.19 34.880±3.90 34.506±2.03 22.335±3.76 14.124±0.43 32.187±1.27 21.320±3.85 23.161±13.24 15.771±1.42
ENSMUST00000138495 N/A 42.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039637 ENSMUST00000038552 13.217±0.90 14.293±0.52 10.322±0.16 12.874±3.23 21.979±8.14 10.241±3.30 4.659±1.10 13.988±0.54 6.827±0.83 15.025±1.97 N/A 13.164±4.25 10.508±3.90 4.304±1.14
ENSMUST00000090480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150028 N/A N/A N/A 83.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039646 ENSMUST00000038770 17.972±2.36 15.041±1.50 16.663±1.22 4.489±0.00 27.634±10.07 10.541±0.20 8.997±1.15 16.416±2.34 6.632±2.00 40.223±5.85 N/A 36.948±12.52 10.912±4.11 7.516±0.34
ENSMUST00000138044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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