C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor coactivator 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039804 Ncoa5 10090 - 2:165000357-165034867 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040381 Ncoa5-001 165000357-165034867 protein_coding
  ENSMUST00000121377 Ncoa5-007 165000360-165034817 protein_coding
  ENSMUST00000122070 Ncoa5-008 165000363-165034788 protein_coding
  ENSMUST00000123347 Ncoa5-002 165002681-165004663 retained_intron
  ENSMUST00000126685 Ncoa5-004 165022672-165023213 processed_transcript
  ENSMUST00000127545 Ncoa5-003 165010120-165034803 retained_intron
  ENSMUST00000141663 Ncoa5-006 165022942-165034787 retained_intron
  ENSMUST00000153905 Ncoa5-005 165012997-165034829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040381ENSMUST00000122070
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040381 7.754±3.07 7.558±3.04 7.789±2.37 27.070±10.80 8.763±1.72 7.504±1.76 4.747±1.75 10.706±1.03 5.679±2.53 8.665±2.71 2.464±0.56 11.009±5.20 7.360±2.82 18.516±1.28
ENSMUST00000122070 2.095±0.48 2.952±0.48 3.004±0.61 12.562±0.90 4.720±2.45 2.535±0.00 1.987±0.52 N/A 1.825±0.64 2.220±0.51 1.894±0.36 8.459±4.59 4.962±2.54 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BH CIL_0007BH_0002 CGP 2:164960816-165034867
CIL_0007BI CIL_0007BI_0002 CGP 2:165000357-165072948

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015629 IEA actin cytoskeleton
GO:0042593 IGI glucose homeostasis
GO:0044822 IEA poly(A) RNA binding
GO:0046627 IMP negative regulation of insulin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016345 ncoa5 nuclear receptor coactivator 5 protein_coding Danio_rerio
ENSG00000124160 NCOA5 nuclear receptor coactivator 5 protein_coding Homo_sapiens

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