C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor coactivator 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040381 Ncoa5-001 ENSMUSG00000039804 10090 - 2:165000357-165034867 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040381 7.754±3.07 7.558±3.04 7.789±2.37 27.070±10.80 8.763±1.72 7.504±1.76 4.747±1.75 10.706±1.03 5.679±2.53 8.665±2.71 2.464±0.56 11.009±5.20 7.360±2.82 18.516±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007BH CIL_0007BH_0002 CGP 2:164960816-165034867
CIL_0007BI CIL_0007BI_0002 CGP 2:165000357-165072948

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0015629 IEA actin cytoskeleton
GO:0042593 IGI glucose homeostasis
GO:0044822 IEA poly(A) RNA binding
GO:0046627 IMP negative regulation of insulin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290231 NCOA5-001 protein_coding Homo_sapiens 0 2468
ENST00000372291 NCOA5-002 protein_coding Homo_sapiens 0 689

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