C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: X Kell blood group precursor-related family, member 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039814 Xkr5 10090 - 8:18932729-18950975 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055503 Xkr5-201 18932729-18950973 protein_coding
  ENSMUST00000095438 Xkr5-001 18932729-18950975 protein_coding
  ENSMUST00000143913 Xkr5-004 18933088-18950937 nonsense_mediated_decay
  ENSMUST00000144987 Xkr5-003 18932729-18950871 processed_transcript
  ENSMUST00000152974 Xkr5-002 18932732-18950916 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055503ENSMUST00000095438ENSMUST00000143913ENSMUST00000144987ENSMUST00000152974
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055503 0.074±0.05 0.198±0.12 N/A 0.191±0.02 0.065±0.00 0.161±0.03 0.037±0.01 N/A 0.368±0.21 0.041±0.00 N/A 0.649±0.24 0.076±0.01 N/A
ENSMUST00000095438 0.352±0.00 0.501±0.29 0.093±0.01 0.089±0.03 N/A 0.289±0.14 0.010±0.00 N/A 0.390±0.18 0.052±0.00 N/A 0.507±0.19 0.161±0.12 0.111±0.07
ENSMUST00000143913 0.113±0.07 N/A N/A 0.052±0.00 0.033±0.00 N/A N/A 0.023±0.01 N/A 0.032±0.01 0.030±0.01 N/A 0.057±0.02 0.054±0.00
ENSMUST00000144987 0.019±0.00 0.057±0.02 0.031±0.00 0.036±0.01 0.062±0.04 0.044±0.00 N/A N/A 0.137±0.07 0.034±0.01 N/A 0.153±0.01 0.043±0.01 N/A
ENSMUST00000152974 N/A N/A N/A N/A 0.056±0.04 N/A N/A N/A N/A N/A N/A 0.330±0.06 0.026±0.00 0.080±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KU CIL_0008KU_0002 VISTA 8:18411246-19012747
CIL_0005PC CIL_0005PC_0002 CGP 8:18846277-18950975

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057155 XRG5 XK-related protein 5 precursor protein_coding Danio_rerio
ENSDARG00000097530 XKR5 (2 of 2) XK, Kell blood group complex subunit-related family, member 5 protein_coding Danio_rerio
ENSG00000275591 XKR5 XK, Kell blood group complex subunit-related family, member 5 protein_coding Homo_sapiens

Loading