C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005PC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155189-ENSG00000275591 CGP 9606 8:6708357-6835644
GeneTranscriptPositionBiotype
ENSG00000155189 (AGPAT5)
1-acylglycerol-3-phosphate O-acyltransferase 5 		ENST00000285518 (AGPAT5-001) 6708357-6759666 protein_coding
ENST00000518327 (AGPAT5-003) 6708693-6757695 protein_coding
ENST00000523234 (AGPAT5-002) 6708666-6758885 nonsense_mediated_decay
ENST00000523586 (AGPAT5-004) 6708860-6730743 nonsense_mediated_decay
ENST00000530716 (AGPAT5-006) 6738376-6757186 processed_transcript
ENST00000533159 (AGPAT5-007) 6747684-6757505 processed_transcript
ENST00000533648 (AGPAT5-005) 6745755-6747742 processed_transcript
ENSG00000245857 (GS1-24F4.2)
uncharacterized LOC100652791 		ENST00000500823 (GS1-24F4.2-001) 6835554-6842457 lincRNA
ENST00000531701 (GS1-24F4.2-002) 6841911-6885276 lincRNA
ENSG00000266038 (MIR4659A)
microRNA 4659a 		ENST00000580269 (MIR4659A-201) 6745164-6745244 miRNA
ENSG00000275591 (XKR5)
XK, Kell blood group complex subunit-related family, member 5 		ENST00000618742 (XKR5-001) 6808517-6835644 protein_coding
ENST00000618990 (XKR5-002) 6808517-6835498 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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CIL_0005PC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031467-ENSMUSG00000039814 CGP 10090 8:18846277-18950975
GeneTranscriptPositionBiotype
ENSMUSG00000031467 (Agpat5)
1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) 		ENSMUST00000033847 (Agpat5-002) 18846279-18883421 protein_coding
ENSMUST00000149565 (Agpat5-001) 18846277-18891361 protein_coding
ENSMUSG00000039814 (Xkr5)
X Kell blood group precursor-related family, member 5 		ENSMUST00000055503 (Xkr5-201) 18932729-18950973 protein_coding
ENSMUST00000095438 (Xkr5-001) 18932729-18950975 protein_coding
ENSMUST00000143913 (Xkr5-004) 18933088-18950937 nonsense_mediated_decay
ENSMUST00000144987 (Xkr5-003) 18932729-18950871 processed_transcript
ENSMUST00000152974 (Xkr5-002) 18932732-18950916 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PC_0001ENSG00000155189ENST00000285518ENST00000518327ENST00000523234ENST00000523586ENST00000530716ENST00000533159ENST00000533648ENSG00000245857ENST00000500823ENST00000531701ENSG00000266038ENST00000580269ENSG00000275591ENST00000618742ENST00000618990CIL_0005PC_0002ENSMUSG00000031467ENSMUST00000033847ENSMUST00000149565ENSMUSG00000039814ENSMUST00000055503ENSMUST00000095438ENSMUST00000143913ENSMUST00000144987ENSMUST00000152974
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005PC_0001ENSG00000155189ENST00000285518ENST00000518327ENST00000523234ENST00000530716ENSG00000245857ENST00000500823ENST00000531701ENSG00000266038ENST00000580269ENSG00000275591ENST00000618742CIL_0005PC_0002ENSMUSG00000031467ENSMUST00000033847ENSMUST00000149565ENSMUSG00000039814ENSMUST00000055503ENSMUST00000095438ENSMUST00000143913ENSMUST00000144987ENSMUST00000152974
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155189 ENST00000285518 2.996±0.00 3.096±0.00 0.564±0.00 7.654±0.00 1.125±0.13 2.974±0.16 0.550±0.45 4.772±2.97 2.025±1.00 1.976±0.00 3.017±0.00 3.409±0.84 3.955±1.06 14.472±3.65
ENST00000518327 N/A N/A N/A N/A N/A 4.716±0.00 N/A N/A 1.672±0.00 N/A 1.836±0.00 10.862±0.00 6.735±0.00 26.528±17.05
ENST00000523234 N/A N/A 3.220±0.00 8.044±0.00 3.182±0.00 1.939±0.00 0.290±0.07 4.660±0.00 0.547±0.00 1.941±0.00 0.350±0.00 3.575±0.44 1.781±0.00 12.472±0.00
ENST00000523586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.176±0.00 73.779±0.00
ENST00000533159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000245857 ENST00000500823 N/A 0.053±0.00 N/A N/A 0.098±0.00 0.024±0.00 N/A N/A N/A 0.137±0.00 N/A 0.076±0.00 N/A 6.075±1.12
ENST00000531701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A
ENSG00000266038 ENST00000580269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.909±0.00
ENSG00000275591 ENST00000618742 0.019±0.00 0.083±0.00 N/A 0.029±0.00 0.032±0.00 0.041±0.03 0.024±0.00 0.089±0.04 0.006±0.00 0.025±0.02 0.032±0.00 0.046±0.03 0.086±0.01 0.199±0.00
ENST00000618990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031467 ENSMUST00000033847 8.396±1.76 20.143±7.33 6.452±0.70 9.999±3.02 5.017±1.47 25.669±3.21 6.221±0.68 6.576±1.88 5.251±2.91 7.372±1.95 4.190±0.42 27.750±11.93 13.033±6.41 2.110±0.50
ENSMUST00000149565 0.457±0.14 N/A 0.711±0.05 1.358±0.41 0.534±0.02 0.931±0.00 0.270±0.03 0.608±0.14 0.311±0.10 0.719±0.05 0.498±0.07 0.329±0.15 0.408±0.23 0.209±0.18
ENSMUSG00000039814 ENSMUST00000055503 0.074±0.05 0.198±0.12 N/A 0.191±0.02 0.065±0.00 0.161±0.03 0.037±0.01 N/A 0.368±0.21 0.041±0.00 N/A 0.649±0.24 0.076±0.01 N/A
ENSMUST00000095438 0.352±0.00 0.501±0.29 0.093±0.01 0.089±0.03 N/A 0.289±0.14 0.010±0.00 N/A 0.390±0.18 0.052±0.00 N/A 0.507±0.19 0.161±0.12 0.111±0.07
ENSMUST00000143913 0.113±0.07 N/A N/A 0.052±0.00 0.033±0.00 N/A N/A 0.023±0.01 N/A 0.032±0.01 0.030±0.01 N/A 0.057±0.02 0.054±0.00
ENSMUST00000144987 0.019±0.00 0.057±0.02 0.031±0.00 0.036±0.01 0.062±0.04 0.044±0.00 N/A N/A 0.137±0.07 0.034±0.01 N/A 0.153±0.01 0.043±0.01 N/A
ENSMUST00000152974 N/A N/A N/A N/A 0.056±0.04 N/A N/A N/A N/A N/A N/A 0.330±0.06 0.026±0.00 0.080±0.01

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