C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039853 Trim14 10090 - 4:46493781-46536141 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046897 Trim14-001 46506847-46536141 protein_coding
  ENSMUST00000102924 Trim14-004 46509676-46536114 protein_coding
  ENSMUST00000136978 Trim14-002 46494819-46534414 processed_transcript
  ENSMUST00000142502 Trim14-005 46507388-46534442 processed_transcript
  ENSMUST00000142606 Trim14-006 46523576-46534604 processed_transcript
  ENSMUST00000184112 Trim14-003 46493781-46536122 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungOvaryENSMUST00000046897
Transcript ID Adrenal Breast Kidney Liver Lung Ovary
ENSMUST00000046897 4.712±0.97 19.243±2.41 1.625±0.00 4.194±0.00 8.243±0.00 9.510±1.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_00029Q CIL_00029Q_0002 CGP 4:46450902-46503632
CIL_00029N CIL_00029N_0002 CGP 4:46489248-46536141
CIL_00029O CIL_00029O_0002 CGP 4:46493781-46602202

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0032897 IEA negative regulation of viral transcription
GO:0045087 IEA innate immune response
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086513 CU138542.2 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000086538 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000086581 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000086594 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000086830 CABZ01068060.1 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000087266 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000087293 si:dkey-84h14.1 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000087699 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000089036 CABZ01071909.1 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000089934 si:ch211-64i20.3 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000090087 CABZ01021435.2 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000090148 BX510909.4 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000090328 si:dkey-16p6.1 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000090392 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000090824 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000090919 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000093114 si:dkey-157e10.6 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000093375 si:ch211-171l17.15 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000093727 si:ch211-237a4.2 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000094607 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000095153 si:dkey-193i10.7 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000095696 trpm2 transient receptor potential cation channel, subfamily M, member 2 protein_coding Danio_rerio
ENSDARG00000095777 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000096038 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000096065 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000096412 si:ch211-15j1.7 tripartite motif containing 14 protein_coding Danio_rerio
ENSDARG00000096492 si:ch211-59d8.3 tripartite motif containing 14 protein_coding Danio_rerio
ENSG00000106785 TRIM14 tripartite motif containing 14 protein_coding Homo_sapiens

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