C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 and cysteine rich domain 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040287 Stac3 10090 + 10:127501686-127508823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035839 Stac3-002 127501717-127508815 protein_coding
  ENSMUST00000160019 Stac3-001 127501686-127508823 protein_coding
  ENSMUST00000160610 Stac3-003 127501694-127502838 protein_coding
  ENSMUST00000160760 Stac3-005 127504491-127507488 retained_intron
  ENSMUST00000162302 Stac3-004 127507225-127507992 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035839ENSMUST00000160019ENSMUST00000160610ENSMUST00000160760ENSMUST00000162302
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035839 N/A N/A N/A 2.152±2.00 N/A 0.125±0.00 N/A N/A N/A 25.495±5.80 N/A N/A N/A
ENSMUST00000160019 0.064±0.00 0.181±0.04 0.397±0.21 4.066±1.02 0.139±0.04 0.090±0.00 0.235±0.12 0.069±0.02 0.230±0.08 77.620±28.93 0.277±0.12 0.304±0.26 0.177±0.05
ENSMUST00000160610 N/A 0.439±0.00 N/A 19.666±0.91 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160760 0.632±0.20 0.541±0.25 N/A 0.547±0.25 0.188±0.09 0.257±0.04 0.250±0.13 0.132±0.08 0.362±0.03 N/A 0.874±0.53 0.321±0.02 0.259±0.00
ENSMUST00000162302 N/A 0.175±0.01 N/A 0.527±0.00 0.277±0.05 N/A 0.123±0.06 0.116±0.06 0.281±0.00 N/A 0.414±0.12 0.404±0.08 0.230±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 ISS skeletal muscle contraction
GO:0005575 ND cellular_component
GO:0007274 ISS neuromuscular synaptic transmission
GO:0035556 IEA intracellular signal transduction
GO:0042802 IEA identical protein binding
GO:0046872 IEA metal ion binding
GO:0048741 IMP skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079996 stac3 SH3 and cysteine rich domain 3 protein_coding Danio_rerio
ENSG00000185482 STAC3 SH3 and cysteine rich domain 3 protein_coding Homo_sapiens

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