C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3 and cysteine rich domain 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185482 STAC3 9606 - 12:57243453-57251193 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332782 STAC3-001 57243453-57251193 protein_coding
  ENST00000546246 STAC3-004 57243654-57251185 protein_coding
  ENST00000553294 STAC3-006 57249019-57251186 retained_intron
  ENST00000553489 STAC3-005 57248126-57251188 protein_coding
  ENST00000554003 STAC3-007 57244757-57248364 retained_intron
  ENST00000554578 STAC3-003 57243453-57251184 protein_coding
  ENST00000557176 STAC3-002 57243459-57251186 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleTestisENST00000332782ENST00000546246ENST00000553294ENST00000554578
Transcript ID Breast Muscle Testis
ENST00000332782 28.566±0.00 222.156±172.50 19.155±3.88
ENST00000546246 N/A 185.528±0.00 N/A
ENST00000553294 N/A 117.745±0.00 N/A
ENST00000554578 N/A 24.373±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KP CIL_0002KP_0002 CGP 12:57234903-57251193

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 IMP skeletal muscle contraction
GO:0005515 IEA protein binding
GO:0007274 IMP neuromuscular synaptic transmission
GO:0035556 IEA intracellular signal transduction
GO:0042802 IPI identical protein binding
GO:0046872 IEA metal ion binding
GO:0048741 IEA skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079996 stac3 SH3 and cysteine rich domain 3 protein_coding Danio_rerio
ENSMUSG00000040287 Stac3 SH3 and cysteine rich domain 3 protein_coding Mus_musculus

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