C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 and cysteine rich domain 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160019 Stac3-001 ENSMUSG00000040287 10090 + 10:127501686-127508823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160019
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160019 0.064±0.00 0.181±0.04 0.397±0.21 4.066±1.02 0.139±0.04 0.090±0.00 0.235±0.12 0.069±0.02 0.230±0.08 77.620±28.93 0.277±0.12 0.304±0.26 0.177±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003009 ISS skeletal muscle contraction
GO:0005575 ND cellular_component
GO:0007274 ISS neuromuscular synaptic transmission
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding
GO:0048741 IMP skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332782 STAC3-001 protein_coding Homo_sapiens 0 1498
ENST00000546246 STAC3-004 protein_coding Homo_sapiens 0 924
ENST00000553489 STAC3-005 protein_coding Homo_sapiens 0 656
ENST00000554003 STAC3-007 retained_intron Homo_sapiens 0 294
ENST00000554578 STAC3-003 protein_coding Homo_sapiens 0 1413
ENST00000557176 STAC3-002 nonsense_mediated_decay Homo_sapiens 0 701

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