C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: superkiller viralicidic activity 2-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046022 Skiv2l-001 ENSMUSG00000040356 10090 - 17:34839244-34850210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046022
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046022 24.191±3.22 35.508±3.34 24.511±5.62 26.125±10.12 20.954±6.21 28.745±2.07 6.510±0.80 19.186±1.17 18.570±5.78 20.424±0.39 8.649±1.33 24.187±4.86 14.758±1.76 51.488±9.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RU CIL_0002RU_0002 CGP 17:34839228-34856372

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0008152 IEA metabolic process
GO:0055087 IEA Ski complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375394 SKIV2L-001 protein_coding Homo_sapiens 0 4337
ENST00000383336 SKIV2L-001 protein_coding Homo_sapiens 0 4337
ENST00000412823 SKIV2L-001 protein_coding Homo_sapiens 0 4337
ENST00000421789 SKIV2L-001 protein_coding Homo_sapiens 0 4337
ENST00000429465 SKIV2L-001 protein_coding Homo_sapiens 0 4331
ENST00000448219 SKIV2L-001 protein_coding Homo_sapiens 0 4337
ENST00000459801 SKIV2L-013 retained_intron Homo_sapiens 0 259
ENST00000460033 SKIV2L-003 processed_transcript Homo_sapiens 0 669
ENST00000461073 SKIV2L-016 nonsense_mediated_decay Homo_sapiens 0 669
ENST00000461360 SKIV2L-010 processed_transcript Homo_sapiens 0 259
ENST00000461915 SKIV2L-007 processed_transcript Homo_sapiens 0 636
ENST00000462557 SKIV2L-014 retained_intron Homo_sapiens 0 507
ENST00000463549 SKIV2L-008 retained_intron Homo_sapiens 0 588
ENST00000464208 SKIV2L-006 processed_transcript Homo_sapiens 0 662
ENST00000464293 SKIV2L-009 retained_intron Homo_sapiens 0 883
ENST00000464568 SKIV2L-012 processed_transcript Homo_sapiens 0 641
ENST00000465225 SKIV2L-004 processed_transcript Homo_sapiens 0 564
ENST00000465599 SKIV2L-002 retained_intron Homo_sapiens 0 2161
ENST00000465703 SKIV2L-002 retained_intron Homo_sapiens 0 2161
ENST00000466283 SKIV2L-013 retained_intron Homo_sapiens 0 259
ENST00000466290 SKIV2L-006 retained_intron Homo_sapiens 0 662
ENST00000466355 SKIV2L-009 retained_intron Homo_sapiens 0 883
ENST00000466463 SKIV2L-010 processed_transcript Homo_sapiens 0 259
ENST00000467720 SKIV2L-008 retained_intron Homo_sapiens 0 588
ENST00000467965 SKIV2L-011 processed_transcript Homo_sapiens 0 261
ENST00000470453 SKIV2L-011 processed_transcript Homo_sapiens 1e-24 117
ENST00000471147 SKIV2L-011 processed_transcript Homo_sapiens 0 261
ENST00000471547 SKIV2L-010 processed_transcript Homo_sapiens 0 259
ENST00000471708 SKIV2L-006 processed_transcript Homo_sapiens 0 656
ENST00000471818 SKIV2L-012 processed_transcript Homo_sapiens 0 641
ENST00000471949 SKIV2L-013 retained_intron Homo_sapiens 0 259
ENST00000472288 SKIV2L-014 retained_intron Homo_sapiens 0 501
ENST00000473290 SKIV2L-007 processed_transcript Homo_sapiens 0 636
ENST00000473594 SKIV2L-011 processed_transcript Homo_sapiens 0 261
ENST00000473773 SKIV2L-004 processed_transcript Homo_sapiens 0 569
ENST00000473816 SKIV2L-007 processed_transcript Homo_sapiens 0 636
ENST00000474839 SKIV2L-017 nonsense_mediated_decay Homo_sapiens 0 3718
ENST00000476338 SKIV2L-010 processed_transcript Homo_sapiens 0 259
ENST00000476485 SKIV2L-002 retained_intron Homo_sapiens 0 2161
ENST00000476651 SKIV2L-003 processed_transcript Homo_sapiens 0 669
ENST00000477512 SKIV2L-004 processed_transcript Homo_sapiens 0 569
ENST00000479061 SKIV2L-006 processed_transcript Homo_sapiens 0 662
ENST00000479139 SKIV2L-012 processed_transcript Homo_sapiens 0 641
ENST00000479354 SKIV2L-008 retained_intron Homo_sapiens 0 588
ENST00000480573 SKIV2L-008 retained_intron Homo_sapiens 0 588
ENST00000480914 SKIV2L-010 processed_transcript Homo_sapiens 0 259
ENST00000483553 SKIV2L-010 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000483978 SKIV2L-013 retained_intron Homo_sapiens 0 259
ENST00000484085 SKIV2L-004 processed_transcript Homo_sapiens 0 569
ENST00000484510 SKIV2L-009 retained_intron Homo_sapiens 0 883
ENST00000484835 SKIV2L-009 retained_intron Homo_sapiens 0 883
ENST00000485243 SKIV2L-014 retained_intron Homo_sapiens 0 501
ENST00000485285 SKIV2L-012 processed_transcript Homo_sapiens 0 641
ENST00000485349 SKIV2L-014 retained_intron Homo_sapiens 0 507
ENST00000485471 SKIV2L-014 retained_intron Homo_sapiens 0 501
ENST00000486945 SKIV2L-007 processed_transcript Homo_sapiens 0 636
ENST00000487095 SKIV2L-006 processed_transcript Homo_sapiens 0 662
ENST00000487359 SKIV2L-012 processed_transcript Homo_sapiens 0 641
ENST00000487690 SKIV2L-004 processed_transcript Homo_sapiens 0 569
ENST00000488648 SKIV2L-003 processed_transcript Homo_sapiens 0 669
ENST00000488660 SKIV2L-009 retained_intron Homo_sapiens 0 883
ENST00000488686 SKIV2L-007 processed_transcript Homo_sapiens 0 636
ENST00000490271 SKIV2L-011 processed_transcript Homo_sapiens 0 261
ENST00000490619 SKIV2L-003 processed_transcript Homo_sapiens 0 669
ENST00000490951 SKIV2L-003 processed_transcript Homo_sapiens 0 669
ENST00000491401 SKIV2L-011 processed_transcript Homo_sapiens 0 261
ENST00000491926 SKIV2L-002 retained_intron Homo_sapiens 0 2161
ENST00000491970 SKIV2L-006 processed_transcript Homo_sapiens 0 662
ENST00000491994 SKIV2L-013 protein_coding Homo_sapiens 0 259
ENST00000492133 SKIV2L-003 processed_transcript Homo_sapiens 0 669
ENST00000493433 SKIV2L-014 retained_intron Homo_sapiens 0 501
ENST00000494058 SKIV2L-008 retained_intron Homo_sapiens 0 588
ENST00000494521 SKIV2L-008 retained_intron Homo_sapiens 0 588
ENST00000494671 SKIV2L-013 retained_intron Homo_sapiens 0 259
ENST00000495470 SKIV2L-009 retained_intron Homo_sapiens 0 883
ENST00000496229 SKIV2L-002 retained_intron Homo_sapiens 0 2161
ENST00000496789 SKIV2L-012 processed_transcript Homo_sapiens 0 641
ENST00000496986 SKIV2L-007 processed_transcript Homo_sapiens 0 636
ENST00000497600 SKIV2L-002 retained_intron Homo_sapiens 0 2161

Loading