C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: INO80 complex subunit D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040865 Ino80d 10090 - 1:62958418-63114667 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000097718 Ino80d-003 63047801-63114667 protein_coding
  ENSMUST00000133236 Ino80d-004 62958418-63091929 nonsense_mediated_decay
  ENSMUST00000137511 Ino80d-001 63062150-63114334 protein_coding
  ENSMUST00000153992 Ino80d-002 63062164-63114255 protein_coding
  ENSMUST00000165066 Ino80d-201 63047801-63114267 protein_coding
  ENSMUST00000172416 Ino80d-202 63047801-63114267 protein_coding
  ENSMUST00000188100 Ino80d-005 63060135-63063561 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000165066ENSMUST00000172416
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000165066 4.353±0.55 6.309±1.24 9.852±0.00 7.558±2.81 9.018±0.67 4.104±0.45 2.098±0.15 6.944±2.43 7.489±1.97 N/A 1.699±0.04
ENSMUST00000172416 4.256±0.00 N/A 4.847±0.00 7.973±2.08 8.094±1.06 N/A 2.669±0.34 3.008±0.08 N/A 4.033±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039J CIL_00039J_0002 CGP 1:62703285-63114667
CIL_00039O CIL_00039O_0002 CGP 1:62958418-63176833

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062226 ino80db INO80 complex subunit Db protein_coding Danio_rerio
ENSDARG00000078199 ino80da INO80 complex subunit Da protein_coding Danio_rerio
ENSG00000114933 INO80D INO80 complex subunit D protein_coding Homo_sapiens

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