C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00039J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000118257-ENSG00000114933 CGP 9606 2:205681990-206086303
GeneTranscriptPositionBiotype
ENSG00000114933 (INO80D)
INO80 complex subunit D 		ENST00000403263 (INO80D-001) 205993721-206086182 protein_coding
ENST00000414320 (INO80D-003) 206062906-206086303 protein_coding
ENST00000424117 (INO80D-004) 206009705-206063244 protein_coding
ENSG00000118257 (NRP2)
neuropilin 2 		ENST00000272849 (NRP2-002) 205683291-205779714 protein_coding
ENST00000357118 (NRP2-003) 205683260-205777156 protein_coding
ENST00000357785 (NRP2-005) 205683260-205795172 protein_coding
ENST00000360409 (NRP2-001) 205682500-205798133 protein_coding
ENST00000412873 (NRP2-004) 205683291-205795058 protein_coding
ENST00000417189 (NRP2-006) 205682507-205743698 protein_coding
ENST00000450507 (NRP2-009) 205682501-205716246 protein_coding
ENST00000460987 (NRP2-016) 205749691-205763807 retained_intron
ENST00000464003 (NRP2-007) 205681990-205701557 processed_transcript
ENST00000467850 (NRP2-015) 205764337-205795121 processed_transcript
ENST00000468256 (NRP2-017) 205752468-205763806 retained_intron
ENST00000472299 (NRP2-014) 205763801-205767064 retained_intron
ENST00000477199 (NRP2-011) 205722265-205723922 retained_intron
ENST00000478013 (NRP2-008) 205682658-205697909 retained_intron
ENST00000478054 (NRP2-012) 205739936-205743693 processed_transcript
ENST00000483917 (NRP2-010) 205685793-205697734 retained_intron
ENST00000485684 (NRP2-013) 205763735-205768481 processed_transcript
ENSG00000213739 (AC007679.1)
 ENST00000458609 (AC007679.1-001) 205949091-205950145 processed_pseudogene
ENSG00000237041 (AC007679.4)
 ENST00000434035 (AC007679.4-001) 206040432-206040845 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00039J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025969-ENSMUSG00000040865 CGP 10090 1:62703285-63114667
GeneTranscriptPositionBiotype
ENSMUSG00000025969 (Nrp2)
neuropilin 2 		ENSMUST00000027112 (Nrp2-005) 62703702-62796981 protein_coding
ENSMUST00000063594 (Nrp2-002) 62703702-62818695 protein_coding
ENSMUST00000075144 (Nrp2-006) 62703285-62818695 protein_coding
ENSMUST00000102822 (Nrp2-001) 62703285-62818695 protein_coding
ENSMUST00000114155 (Nrp2-004) 62703702-62799314 protein_coding
ENSMUST00000114157 (Nrp2-003) 62703702-62818695 protein_coding
ENSMUST00000126344 (Nrp2-007) 62703285-62739932 retained_intron
ENSMUSG00000081429 (Rps27-ps1)
ribosomal protein S27, pseudogene 1 		ENSMUST00000118179 (Rps27-ps1-001) 63073774-63074019 processed_pseudogene
ENSMUSG00000081617 (Rps13-ps7)
ribosomal protein S13, pseudogene 7 		ENSMUST00000122045 (Rps13-ps7-001) 63038214-63038581 processed_pseudogene
ENSMUSG00000100426 (RP23-149A5.3)
predicted gene 4208 		ENSMUST00000189802 (RP23-149A5.3-001) 62821355-62832370 lincRNA
ENSMUSG00000100811 (RP23-20G7.7)
predicted gene 29083 		ENSMUST00000189205 (RP23-20G7.7-001) 62714723-62718073 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039J_0001ENSG00000114933ENST00000403263ENST00000414320ENST00000424117ENSG00000118257ENST00000272849ENST00000357118ENST00000357785ENST00000360409ENST00000412873ENST00000417189ENST00000450507ENST00000460987ENST00000464003ENST00000467850ENST00000468256ENST00000472299ENST00000477199ENST00000478013ENST00000478054ENST00000483917ENST00000485684ENSG00000213739ENST00000458609ENSG00000237041ENST00000434035CIL_00039J_0002ENSMUSG00000025969ENSMUST00000027112ENSMUST00000063594ENSMUST00000075144ENSMUST00000102822ENSMUST00000114155ENSMUST00000114157ENSMUST00000126344ENSMUSG00000081429ENSMUST00000118179ENSMUSG00000081617ENSMUST00000122045ENSMUSG00000100426ENSMUST00000189802ENSMUSG00000100811ENSMUST00000189205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039J_0001ENSG00000114933ENST00000403263ENSG00000118257ENST00000272849ENST00000357118ENST00000357785ENST00000360409ENST00000412873ENST00000450507ENST00000467850ENST00000478013ENST00000485684ENSG00000213739ENST00000458609ENSG00000237041ENST00000434035CIL_00039J_0002ENSMUSG00000025969ENSMUST00000027112ENSMUST00000063594ENSMUST00000075144ENSMUST00000102822ENSMUST00000114155ENSMUST00000114157ENSMUST00000126344ENSMUSG00000081429ENSMUST00000118179ENSMUSG00000081617ENSMUST00000122045ENSMUSG00000100426ENSMUST00000189802ENSMUSG00000100811ENSMUST00000189205
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114933 ENST00000403263 0.271±0.00 0.809±0.00 0.999±0.00 1.656±0.57 1.656±1.17 1.347±1.16 0.904±0.15 1.618±0.00 0.111±0.00 1.706±0.56 1.261±0.14 2.528±1.07 0.562±0.24 1.198±0.00
ENST00000414320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000118257 ENST00000272849 N/A 1.972±0.00 0.142±0.00 1.212±0.00 2.483±0.41 4.967±3.27 0.291±0.00 N/A 3.598±3.11 N/A 0.177±0.00 5.254±2.87 3.808±0.59 1.718±0.00
ENST00000357118 N/A N/A 0.246±0.00 0.459±0.00 2.462±0.00 2.001±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000357785 N/A N/A N/A N/A N/A N/A N/A 0.806±0.00 1.091±0.00 3.230±0.00 0.219±0.00 N/A N/A N/A
ENST00000360409 3.744±0.00 1.075±0.00 N/A 1.054±0.00 1.776±0.00 1.754±0.00 0.446±0.00 N/A 1.575±1.27 1.056±0.00 N/A 5.853±4.50 8.857±5.68 1.274±0.00
ENST00000412873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.449±0.00 N/A N/A N/A
ENST00000417189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450507 N/A N/A 1.076±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.295±0.00 N/A N/A N/A
ENST00000468256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478013 N/A N/A 0.535±0.00 N/A N/A N/A N/A N/A 18.493±0.00 N/A N/A 13.111±0.00 N/A N/A
ENST00000478054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485684 N/A N/A 0.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213739 ENST00000458609 0.029±0.00 0.061±0.00 N/A 0.097±0.00 0.031±0.00 0.028±0.00 N/A 0.030±0.00 0.027±0.00 0.057±0.00 0.026±0.00 N/A N/A N/A
ENSG00000237041 ENST00000434035 N/A 0.111±0.00 N/A N/A 0.329±0.00 N/A 0.742±0.00 1.449±0.00 N/A 0.852±0.00 N/A 1.161±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025969 ENSMUST00000027112 3.987±0.06 N/A N/A N/A 2.010±0.20 6.448±0.97 1.573±0.00 1.514±0.30 0.410±0.00 3.174±0.49 N/A N/A 0.771±0.00 0.392±0.13
ENSMUST00000063594 3.034±0.78 N/A 18.662±0.06 9.064±4.76 4.212±2.00 N/A 2.448±0.87 2.221±0.37 1.125±0.61 3.192±1.05 0.825±0.30 7.211±3.78 2.240±0.83 0.348±0.17
ENSMUST00000075144 2.234±0.00 6.660±2.00 N/A N/A 6.972±0.57 8.218±3.48 1.283±0.00 3.013±1.95 0.925±0.57 2.978±0.21 0.367±0.00 7.514±2.82 0.887±0.00 N/A
ENSMUST00000102822 5.276±2.09 8.199±2.13 14.593±0.34 7.955±4.94 4.192±0.79 7.197±2.08 2.987±0.33 2.727±0.38 0.634±0.41 4.603±1.69 0.389±0.16 6.418±1.56 1.764±0.80 0.132±0.06
ENSMUST00000114155 2.508±0.53 3.137±0.59 32.307±4.16 3.496±1.42 2.860±1.00 8.758±0.95 1.543±0.14 1.858±0.30 0.208±0.10 4.073±0.42 0.453±0.04 5.182±1.00 0.992±0.58 0.289±0.06
ENSMUST00000114157 N/A N/A N/A N/A 1.589±0.00 N/A N/A N/A 0.596±0.30 N/A 0.194±0.00 N/A 1.053±0.00 0.141±0.00
ENSMUST00000126344 N/A 4.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081429 ENSMUST00000118179 0.959±0.30 N/A 0.217±0.00 0.247±0.02 N/A N/A N/A 0.924±0.29 0.703±0.81 0.779±0.00 N/A 0.595±0.21 0.331±0.28 0.536±0.01
ENSMUSG00000081617 ENSMUST00000122045 N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 0.144±0.00
ENSMUSG00000100426 ENSMUST00000189802 0.110±0.02 N/A 0.117±0.04 0.049±0.01 0.079±0.03 0.078±0.00 0.037±0.00 0.548±0.04 0.047±0.04 0.078±0.04 N/A 0.125±0.04 0.021±0.01 0.043±0.00
ENSMUSG00000100811 ENSMUST00000189205 0.111±0.05 N/A 0.113±0.00 0.165±0.12 0.254±0.00 0.129±0.00 0.053±0.00 0.153±0.00 0.020±0.01 0.091±0.01 0.162±0.00 0.322±0.21 0.048±0.02 N/A

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