C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intermediate filament family orphan 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041025 Iffo2 10090 + 4:139530548-139620382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040023 Iffo2-201 139531689-139620379 protein_coding
  ENSMUST00000123827 Iffo2-001 139530548-139617082 protein_coding
  ENSMUST00000174078 Iffo2-002 139574720-139620382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLungOvaryPlacentaTestisENSMUST00000040023ENSMUST00000123827ENSMUST00000174078
Transcript ID Adipose Bladder Brain Breast Colon Lung Ovary Placenta Testis
ENSMUST00000040023 N/A N/A N/A 3.874±0.00 3.075±0.00 N/A 6.154±0.00 N/A 0.657±0.00
ENSMUST00000123827 N/A N/A N/A N/A N/A N/A N/A 29.879±15.93 N/A
ENSMUST00000174078 6.099±1.11 3.514±0.36 4.183±1.00 6.034±0.76 2.741±1.35 4.996±1.35 5.497±1.19 8.640±3.43 0.552±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WQ CIL_0003WQ_0002 CGP 4:139352609-139620382

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005575 ND cellular_component
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019157 CABZ01030889.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000062101 iffo2a intermediate filament family orphan 2a protein_coding Danio_rerio
ENSG00000169991 IFFO2 intermediate filament family orphan 2 protein_coding Homo_sapiens
ENSG00000255275 RP13-279N23.2 protein_coding Homo_sapiens

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