C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intermediate filament family orphan 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169991 IFFO2 9606 - 1:18904281-18956686 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355609 IFFO2-003 18908291-18911992 protein_coding
  ENST00000416166 IFFO2-002 18908340-18955698 protein_coding
  ENST00000455833 IFFO2-001 18904281-18956686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355609ENST00000416166ENST00000455833
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355609 N/A N/A N/A N/A N/A 4.277±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416166 N/A N/A N/A 1.929±0.00 N/A N/A N/A N/A 3.049±0.00 1.623±0.00 N/A 6.594±1.90 N/A 1.190±0.00
ENST00000455833 1.552±0.00 3.364±0.00 0.878±0.00 3.907±2.97 4.203±3.21 1.585±0.94 0.590±0.29 7.269±0.00 1.266±0.00 3.646±2.44 1.256±0.00 3.092±0.72 4.367±1.17 1.098±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CW CIL_0008CW_0001 VISTA 1:18332177-18933790
CIL_0002WB CIL_0002WB_0002 CGP 1:18849273-18921121

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019157 CABZ01030889.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000062101 iffo2a intermediate filament family orphan 2a protein_coding Danio_rerio
ENSMUSG00000041025 Iffo2 intermediate filament family orphan 2 protein_coding Mus_musculus
ENSMUSG00000094439 Gm21969 predicted gene 21969 protein_coding Mus_musculus

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