C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IQ motif and Sec7 domain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041115 Iqsec2 10090 + X:152144268-152225236 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096275 Iqsec2-003 152178964-152225236 protein_coding
  ENSMUST00000112604 Iqsec2-002 152144272-152225236 protein_coding
  ENSMUST00000112605 Iqsec2-001 152144272-152225236 protein_coding
  ENSMUST00000128724 Iqsec2-005 152178964-152194601 processed_transcript
  ENSMUST00000146835 Iqsec2-004 152178964-152194601 processed_transcript
  ENSMUST00000153356 Iqsec2-006 152178964-152204004 processed_transcript
  ENSMUST00000168786 Iqsec2-201 152144268-152225235 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096275ENSMUST00000112604ENSMUST00000112605ENSMUST00000128724ENSMUST00000146835ENSMUST00000168786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096275 N/A 1.394±0.00 N/A N/A 0.522±0.21 N/A N/A 0.878±0.08 0.146±0.05 N/A 0.185±0.00 5.019±0.00 0.607±0.46 0.226±0.00
ENSMUST00000112604 2.029±0.63 6.781±0.61 1.695±0.92 4.129±5.01 1.671±0.55 3.806±0.98 1.399±0.25 1.419±0.22 0.254±0.18 5.218±0.45 0.654±0.03 1.998±0.57 0.319±0.15 0.236±0.00
ENSMUST00000112605 N/A N/A N/A 2.887±2.88 N/A N/A 1.229±0.00 N/A 0.086±0.00 N/A 0.922±0.34 0.435±0.00 0.043±0.00 0.286±0.06
ENSMUST00000128724 3.992±0.00 N/A 1.862±0.00 N/A 6.781±2.75 N/A N/A 23.196±3.08 1.895±1.25 N/A 1.845±0.00 N/A N/A N/A
ENSMUST00000146835 N/A N/A 1.145±0.00 1.607±0.00 3.125±0.37 N/A 34.953±4.00 7.827±1.34 1.142±0.70 N/A 3.587±0.84 N/A N/A N/A
ENSMUST00000168786 0.575±0.00 1.065±0.00 N/A N/A 0.305±0.00 N/A N/A N/A N/A N/A 0.417±0.00 0.482±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062O CIL_00062O_0002 CGP X:152144268-152274535

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005634 IBA nucleus
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077709 iqsec2 IQ motif and Sec7 domain 2 protein_coding Danio_rerio
ENSG00000124313 IQSEC2 IQ motif and Sec7 domain 2 protein_coding Homo_sapiens

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