C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IQ motif and Sec7 domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112604 Iqsec2-002 ENSMUSG00000041115 10090 + X:152144272-152225236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112604 2.029±0.63 6.781±0.61 1.695±0.92 4.129±5.01 1.671±0.55 3.806±0.98 1.399±0.25 1.419±0.22 0.254±0.18 5.218±0.45 0.654±0.03 1.998±0.57 0.319±0.15 0.236±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062O CIL_00062O_0002 CGP X:152144268-152274535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005634 IBA nucleus
GO:0030036 IBA actin cytoskeleton organization
GO:0030054 IBA cell junction
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137037 iqsec3b-001 protein_coding Danio_rerio 0 274
ENST00000375365 IQSEC2-009 protein_coding Homo_sapiens 0 5456
ENST00000396435 IQSEC2-012 protein_coding Homo_sapiens 0 5330

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