C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntrophin, basic 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041308 Sntb2 10090 + 8:106935750-107014192 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047425 Sntb2-201 106935750-107014192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047425
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047425 5.995±3.23 10.017±1.13 5.371±0.00 1.001±0.09 8.951±1.25 3.339±0.56 2.280±0.23 5.011±0.60 0.843±0.24 8.376±0.60 0.739±0.11 11.861±5.18 1.193±0.50 6.944±3.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004I5 CIL_0004I5_0002 CGP 8:106893640-107014192
CIL_0004YA CIL_0004YA_0003 CGP 8:106935750-107045755

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0005925 IEA focal adhesion
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0031410 IEA cytoplasmic vesicle
GO:0043234 ISO protein complex
GO:0044822 IEA poly(A) RNA binding
GO:0045202 IDA synapse
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051763 SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) protein_coding Danio_rerio
ENSG00000168807 SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) protein_coding Homo_sapiens

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