C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cleavage and polyadenylation factor subunit homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041328 Pcf11 10090 - 7:92643712-92669933 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000119954 Pcf11-001 92643712-92669933 protein_coding
  ENSMUST00000148539 Pcf11-003 92646818-92648209 retained_intron
  ENSMUST00000151177 Pcf11-002 92644260-92663537 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119954ENSMUST00000151177
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119954 1.877±1.04 4.936±0.88 5.081±3.33 2.415±1.60 2.354±0.57 1.088±0.20 1.099±0.35 3.299±2.76 1.727±0.78 1.691±0.32 3.305±2.56 3.651±1.70 7.305±3.85
ENSMUST00000151177 N/A 1.621±0.11 2.203±1.14 1.124±0.12 N/A N/A N/A 1.139±0.66 0.887±0.00 0.599±0.17 3.343±1.96 3.172±1.98 27.638±25.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044625 pcf11 cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000165494 PCF11 PCF11 cleavage and polyadenylation factor subunit protein_coding Homo_sapiens

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