C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage and polyadenylation factor subunit homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119954 Pcf11-001 ENSMUSG00000041328 10090 - 7:92643712-92669933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119954
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119954 1.877±1.04 4.936±0.88 5.081±3.33 2.415±1.60 2.354±0.57 1.088±0.20 1.099±0.35 3.299±2.76 1.727±0.78 1.691±0.32 3.305±2.56 3.651±1.70 7.305±3.85

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298281 PCF11-001 protein_coding Homo_sapiens 0 7275
ENST00000528336 PCF11-007 retained_intron Homo_sapiens 0 652
ENST00000530304 PCF11-002 protein_coding Homo_sapiens 0 3550
ENST00000530660 PCF11-003 protein_coding Homo_sapiens 0 3221
ENST00000530906 PCF11-006 protein_coding Homo_sapiens 0 734
ENST00000533018 PCF11-005 protein_coding Homo_sapiens 0 688
ENST00000620955 PCF11-201 protein_coding Homo_sapiens 0 3542
ENST00000624931 PCF11-004 TEC Homo_sapiens 0 686

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