C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 74A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041617 Ccdc74a 10090 + 16:17646470-17650738 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056962 Ccdc74a-001 17646475-17650738 protein_coding
  ENSMUST00000182117 Ccdc74a-006 17646564-17650737 protein_coding
  ENSMUST00000182344 Ccdc74a-009 17646618-17650447 protein_coding
  ENSMUST00000182368 Ccdc74a-003 17646475-17649241 nonsense_mediated_decay
  ENSMUST00000182526 Ccdc74a-004 17646673-17647861 retained_intron
  ENSMUST00000182671 Ccdc74a-008 17646613-17650738 protein_coding
  ENSMUST00000182822 Ccdc74a-002 17646470-17649415 retained_intron
  ENSMUST00000182976 Ccdc74a-007 17646565-17650409 nonsense_mediated_decay
  ENSMUST00000183101 Ccdc74a-005 17646551-17648473 retained_intron
  ENSMUST00000183279 Ccdc74a-010 17646700-17650738 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056962ENSMUST00000182117ENSMUST00000182344ENSMUST00000182368ENSMUST00000182526ENSMUST00000182671ENSMUST00000182822ENSMUST00000182976ENSMUST00000183101ENSMUST00000183279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056962 N/A N/A 0.127±0.00 0.353±0.07 0.117±0.00 N/A 0.098±0.01 N/A 0.283±0.07 1.201±0.51 0.158±0.05 1.648±0.74 0.099±0.06 32.880±13.21
ENSMUST00000182117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A
ENSMUST00000182344 N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A
ENSMUST00000182368 N/A 0.172±0.00 N/A N/A 0.388±0.10 0.365±0.00 N/A 0.090±0.00 0.063±0.00 N/A 0.078±0.00 1.216±0.36 0.767±0.00 N/A
ENSMUST00000182526 N/A N/A N/A N/A N/A N/A 0.936±0.00 0.460±0.15 N/A N/A 0.214±0.04 N/A 1.806±0.00 N/A
ENSMUST00000182671 N/A N/A 0.278±0.00 0.844±0.10 0.245±0.04 N/A N/A 0.141±0.12 0.303±0.23 N/A 0.157±0.03 2.372±0.00 0.348±0.15 N/A
ENSMUST00000182822 0.585±0.00 0.212±0.08 0.191±0.00 0.762±0.08 0.347±0.03 N/A N/A 0.066±0.02 0.312±0.08 N/A 0.148±0.03 1.348±0.42 0.230±0.08 11.845±5.08
ENSMUST00000182976 N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000183101 N/A N/A 0.179±0.00 1.340±0.09 0.289±0.00 N/A 0.314±0.00 0.060±0.00 0.373±0.20 N/A 0.293±0.06 2.926±0.00 0.252±0.10 N/A
ENSMUST00000183279 N/A N/A 0.344±0.00 0.610±0.00 N/A N/A N/A 0.145±0.09 0.552±0.18 1.452±0.00 0.287±0.00 1.289±0.00 0.253±0.06 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0004H9 CIL_0004H9_0002 CGP 16:17619354-17650738
CIL_0004HX CIL_0004HX_0002 CGP 16:17646470-17722930

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093026 CCDC74B coiled-coil domain containing 74B protein_coding Danio_rerio
ENSG00000152076 CCDC74B coiled-coil domain containing 74B protein_coding Homo_sapiens
ENSG00000163040 CCDC74A coiled-coil domain containing 74A protein_coding Homo_sapiens

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