C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000093026-ENSDARG00000014292 CGP 7955 21:17740430-17761760
GeneTranscriptPositionBiotype
ENSDARG00000014292 (med15)
mediator complex subunit 15 		ENSDART00000021997 (med15-001) 17744431-17761760 protein_coding
ENSDART00000139622 (med15-002) 17757821-17761637 nonsense_mediated_decay
ENSDART00000140129 (med15-003) 17747041-17747873 protein_coding
ENSDARG00000020730 (smpd4)
sphingomyelin phosphodiesterase 4 		ENSDART00000017937 (smpd4-201) 17722272-17740898 protein_coding
ENSDART00000130519 (smpd4-001) 17722272-17740899 protein_coding
ENSDART00000133396 (smpd4-005) 17735531-17736526 retained_intron
ENSDART00000137143 (smpd4-002) 17722324-17724566 protein_coding
ENSDART00000141659 (smpd4-006) 17738260-17742012 processed_transcript
ENSDART00000144131 (smpd4-004) 17733340-17737933 retained_intron
ENSDART00000147567 (smpd4-003) 17725614-17738081 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004HX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041617-ENSMUSG00000012114 CGP 10090 16:17646470-17722930
GeneTranscriptPositionBiotype
ENSMUSG00000012114 (Med15)
mediator complex subunit 15 		ENSMUST00000012259 (Med15-201) 17651221-17722930 protein_coding
ENSMUST00000080936 (Med15-202) 17651221-17722930 protein_coding
ENSMUSG00000041617 (Ccdc74a)
coiled-coil domain containing 74A 		ENSMUST00000056962 (Ccdc74a-001) 17646475-17650738 protein_coding
ENSMUST00000182117 (Ccdc74a-006) 17646564-17650737 protein_coding
ENSMUST00000182344 (Ccdc74a-009) 17646618-17650447 protein_coding
ENSMUST00000182368 (Ccdc74a-003) 17646475-17649241 nonsense_mediated_decay
ENSMUST00000182526 (Ccdc74a-004) 17646673-17647861 retained_intron
ENSMUST00000182671 (Ccdc74a-008) 17646613-17650738 protein_coding
ENSMUST00000182822 (Ccdc74a-002) 17646470-17649415 retained_intron
ENSMUST00000182976 (Ccdc74a-007) 17646565-17650409 nonsense_mediated_decay
ENSMUST00000183101 (Ccdc74a-005) 17646551-17648473 retained_intron
ENSMUST00000183279 (Ccdc74a-010) 17646700-17650738 nonsense_mediated_decay
ENSMUSG00000059150 (Rpl26-ps4)
ribosomal protein L26, pseudogene 4 		ENSMUST00000170279 (Rpl26-ps4-201) 17711668-17712105 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HX_0001ENSDARG00000014292ENSDART00000021997ENSDART00000139622ENSDART00000140129ENSDARG00000020730ENSDART00000017937ENSDART00000130519ENSDART00000133396ENSDART00000137143ENSDART00000141659ENSDART00000144131ENSDART00000147567CIL_0004HX_0002ENSMUSG00000012114ENSMUST00000012259ENSMUST00000080936ENSMUSG00000041617ENSMUST00000056962ENSMUST00000182117ENSMUST00000182344ENSMUST00000182368ENSMUST00000182526ENSMUST00000182671ENSMUST00000182822ENSMUST00000182976ENSMUST00000183101ENSMUST00000183279ENSMUSG00000059150ENSMUST00000170279
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HX_0001ENSDARG00000014292ENSDART00000021997ENSDARG00000020730ENSDART00000017937ENSDART00000130519ENSDART00000133396CIL_0004HX_0002ENSMUSG00000012114ENSMUST00000012259ENSMUST00000080936ENSMUSG00000041617ENSMUST00000056962ENSMUST00000182117ENSMUST00000182344ENSMUST00000182368ENSMUST00000182526ENSMUST00000182671ENSMUST00000182822ENSMUST00000182976ENSMUST00000183101ENSMUST00000183279ENSMUSG00000059150ENSMUST00000170279
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014292 ENSDART00000021997 N/A N/A N/A 7.325±1.43 N/A N/A 6.764±1.49 2.540±0.00 0.840±0.00 N/A 3.795±0.00 N/A N/A N/A
ENSDART00000139622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000020730 ENSDART00000017937 N/A N/A N/A 0.511±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130519 N/A N/A N/A 2.103±1.51 N/A N/A 1.425±0.00 1.139±0.28 0.498±0.00 N/A 1.224±0.00 N/A N/A N/A
ENSDART00000133396 N/A N/A N/A 0.960±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000012114 ENSMUST00000012259 10.032±3.35 21.251±1.22 12.807±4.65 9.629±3.58 17.805±2.30 18.928±2.30 3.663±1.18 6.743±0.49 7.669±2.50 14.776±2.53 3.079±0.69 14.002±5.72 10.009±6.81 11.629±4.64
ENSMUST00000080936 3.103±0.36 5.905±1.90 1.930±0.08 10.119±3.81 4.373±0.64 7.547±1.39 2.596±0.32 2.983±0.90 2.165±0.64 5.136±1.68 1.100±0.38 8.368±1.70 6.877±5.46 5.298±0.27
ENSMUSG00000041617 ENSMUST00000056962 N/A N/A 0.127±0.00 0.353±0.07 0.117±0.00 N/A 0.098±0.01 N/A 0.283±0.07 1.201±0.51 0.158±0.05 1.648±0.74 0.099±0.06 32.880±13.21
ENSMUST00000182117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A
ENSMUST00000182344 N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A
ENSMUST00000182368 N/A 0.172±0.00 N/A N/A 0.388±0.10 0.365±0.00 N/A 0.090±0.00 0.063±0.00 N/A 0.078±0.00 1.216±0.36 0.767±0.00 N/A
ENSMUST00000182526 N/A N/A N/A N/A N/A N/A 0.936±0.00 0.460±0.15 N/A N/A 0.214±0.04 N/A 1.806±0.00 N/A
ENSMUST00000182671 N/A N/A 0.278±0.00 0.844±0.10 0.245±0.04 N/A N/A 0.141±0.12 0.303±0.23 N/A 0.157±0.03 2.372±0.00 0.348±0.15 N/A
ENSMUST00000182822 0.585±0.00 0.212±0.08 0.191±0.00 0.762±0.08 0.347±0.03 N/A N/A 0.066±0.02 0.312±0.08 N/A 0.148±0.03 1.348±0.42 0.230±0.08 11.845±5.08
ENSMUST00000182976 N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000183101 N/A N/A 0.179±0.00 1.340±0.09 0.289±0.00 N/A 0.314±0.00 0.060±0.00 0.373±0.20 N/A 0.293±0.06 2.926±0.00 0.252±0.10 N/A
ENSMUST00000183279 N/A N/A 0.344±0.00 0.610±0.00 N/A N/A N/A 0.145±0.09 0.552±0.18 1.452±0.00 0.287±0.00 1.289±0.00 0.253±0.06 N/A
ENSMUSG00000059150 ENSMUST00000170279 0.663±0.39 0.333±0.00 N/A N/A 0.811±0.51 0.476±0.12 0.242±0.00 0.572±0.25 0.390±0.19 0.417±0.31 0.163±0.00 1.338±1.26 0.325±0.08 0.353±0.08

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