C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004H9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020730-ENSDARG00000093026 CGP 7955 21:17722272-17744520
GeneTranscriptPositionBiotype
ENSDARG00000014292 (med15)
mediator complex subunit 15 		ENSDART00000021997 (med15-001) 17744431-17761760 protein_coding
ENSDART00000139622 (med15-002) 17757821-17761637 nonsense_mediated_decay
ENSDART00000140129 (med15-003) 17747041-17747873 protein_coding
ENSDARG00000020730 (smpd4)
sphingomyelin phosphodiesterase 4 		ENSDART00000017937 (smpd4-201) 17722272-17740898 protein_coding
ENSDART00000130519 (smpd4-001) 17722272-17740899 protein_coding
ENSDART00000133396 (smpd4-005) 17735531-17736526 retained_intron
ENSDART00000137143 (smpd4-002) 17722324-17724566 protein_coding
ENSDART00000141659 (smpd4-006) 17738260-17742012 processed_transcript
ENSDART00000144131 (smpd4-004) 17733340-17737933 retained_intron
ENSDART00000147567 (smpd4-003) 17725614-17738081 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004H9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005899-ENSMUSG00000041617 CGP 10090 16:17619354-17650738
GeneTranscriptPositionBiotype
ENSMUSG00000005899 (Smpd4)
sphingomyelin phosphodiesterase 4 		ENSMUST00000006053 (Smpd4-001) 17619354-17644828 protein_coding
ENSMUST00000087486 (Smpd4-017) 17619363-17621995 retained_intron
ENSMUST00000090159 (Smpd4-004) 17619363-17644827 protein_coding
ENSMUST00000163476 (Smpd4-002) 17619357-17644827 protein_coding
ENSMUST00000163592 (Smpd4-015) 17619389-17626004 protein_coding
ENSMUST00000163997 (Smpd4-011) 17621487-17642803 protein_coding
ENSMUST00000164292 (Smpd4-022) 17638322-17641062 retained_intron
ENSMUST00000165092 (Smpd4-016) 17619517-17623946 protein_coding
ENSMUST00000165363 (Smpd4-003) 17619360-17643347 protein_coding
ENSMUST00000166091 (Smpd4-005) 17619381-17642148 retained_intron
ENSMUST00000166322 (Smpd4-023) 17619363-17624284 retained_intron
ENSMUST00000167217 (Smpd4-010) 17619374-17638525 nonsense_mediated_decay
ENSMUST00000167362 (Smpd4-013) 17619357-17639275 processed_transcript
ENSMUST00000167592 (Smpd4-020) 17638587-17640966 retained_intron
ENSMUST00000168101 (Smpd4-008) 17619360-17626648 protein_coding
ENSMUST00000169662 (Smpd4-018) 17619363-17625840 protein_coding
ENSMUST00000170117 (Smpd4-012) 17621487-17642803 nonsense_mediated_decay
ENSMUST00000170273 (Smpd4-014) 17621487-17642803 protein_coding
ENSMUST00000170366 (Smpd4-009) 17621487-17642803 protein_coding
ENSMUST00000170401 (Smpd4-006) 17619363-17644827 retained_intron
ENSMUST00000170996 (Smpd4-007) 17621487-17642803 protein_coding
ENSMUST00000171435 (Smpd4-019) 17619357-17626446 protein_coding
ENSMUST00000172182 (Smpd4-021) 17619377-17626685 protein_coding
ENSMUSG00000041617 (Ccdc74a)
coiled-coil domain containing 74A 		ENSMUST00000056962 (Ccdc74a-001) 17646475-17650738 protein_coding
ENSMUST00000182117 (Ccdc74a-006) 17646564-17650737 protein_coding
ENSMUST00000182344 (Ccdc74a-009) 17646618-17650447 protein_coding
ENSMUST00000182368 (Ccdc74a-003) 17646475-17649241 nonsense_mediated_decay
ENSMUST00000182526 (Ccdc74a-004) 17646673-17647861 retained_intron
ENSMUST00000182671 (Ccdc74a-008) 17646613-17650738 protein_coding
ENSMUST00000182822 (Ccdc74a-002) 17646470-17649415 retained_intron
ENSMUST00000182976 (Ccdc74a-007) 17646565-17650409 nonsense_mediated_decay
ENSMUST00000183101 (Ccdc74a-005) 17646551-17648473 retained_intron
ENSMUST00000183279 (Ccdc74a-010) 17646700-17650738 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004H9_0001ENSDARG00000014292ENSDART00000021997ENSDART00000139622ENSDART00000140129ENSDARG00000020730ENSDART00000017937ENSDART00000130519ENSDART00000133396ENSDART00000137143ENSDART00000141659ENSDART00000144131ENSDART00000147567CIL_0004H9_0002ENSMUSG00000005899ENSMUST00000006053ENSMUST00000087486ENSMUST00000090159ENSMUST00000163476ENSMUST00000163592ENSMUST00000163997ENSMUST00000164292ENSMUST00000165092ENSMUST00000165363ENSMUST00000166091ENSMUST00000166322ENSMUST00000167217ENSMUST00000167362ENSMUST00000167592ENSMUST00000168101ENSMUST00000169662ENSMUST00000170117ENSMUST00000170273ENSMUST00000170366ENSMUST00000170401ENSMUST00000170996ENSMUST00000171435ENSMUST00000172182ENSMUSG00000041617ENSMUST00000056962ENSMUST00000182117ENSMUST00000182344ENSMUST00000182368ENSMUST00000182526ENSMUST00000182671ENSMUST00000182822ENSMUST00000182976ENSMUST00000183101ENSMUST00000183279
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004H9_0001ENSDARG00000014292ENSDART00000021997ENSDARG00000020730ENSDART00000017937ENSDART00000130519ENSDART00000133396CIL_0004H9_0002ENSMUSG00000005899ENSMUST00000006053ENSMUST00000163476ENSMUST00000164292ENSMUST00000165363ENSMUST00000167217ENSMUST00000167362ENSMUST00000170117ENSMUST00000170273ENSMUST00000170366ENSMUST00000170401ENSMUSG00000041617ENSMUST00000056962ENSMUST00000182117ENSMUST00000182344ENSMUST00000182368ENSMUST00000182526ENSMUST00000182671ENSMUST00000182822ENSMUST00000182976ENSMUST00000183101ENSMUST00000183279
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014292 ENSDART00000021997 N/A N/A N/A 7.325±1.43 N/A N/A 6.764±1.49 2.540±0.00 0.840±0.00 N/A 3.795±0.00 N/A N/A N/A
ENSDART00000139622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000020730 ENSDART00000017937 N/A N/A N/A 0.511±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130519 N/A N/A N/A 2.103±1.51 N/A N/A 1.425±0.00 1.139±0.28 0.498±0.00 N/A 1.224±0.00 N/A N/A N/A
ENSDART00000133396 N/A N/A N/A 0.960±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005899 ENSMUST00000006053 N/A N/A 4.286±0.00 2.857±0.00 N/A N/A 1.306±0.12 1.146±0.00 3.336±1.25 1.973±0.00 1.342±0.21 2.214±0.00 2.020±0.21 N/A
ENSMUST00000087486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000090159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163476 N/A N/A N/A 3.144±0.00 N/A N/A N/A N/A 4.808±0.36 N/A N/A N/A N/A N/A
ENSMUST00000163592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164292 N/A 12.722±3.68 N/A N/A 6.355±0.00 9.342±0.00 N/A N/A N/A N/A N/A 15.155±1.59 N/A N/A
ENSMUST00000165092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165363 5.543±1.24 4.891±1.36 6.873±0.04 8.584±1.13 3.407±1.23 2.969±0.51 2.788±0.67 5.471±0.62 5.166±3.96 3.761±0.44 1.372±0.45 6.081±1.41 5.226±1.94 20.809±5.56
ENSMUST00000166091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167217 N/A N/A N/A N/A 7.875±0.00 N/A N/A N/A 3.023±0.00 N/A N/A N/A N/A N/A
ENSMUST00000167362 N/A N/A N/A N/A 11.972±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170117 9.724±1.07 11.438±3.10 5.764±0.00 N/A 6.344±1.67 4.902±0.72 5.048±0.46 5.132±0.73 3.409±1.48 7.402±2.99 1.506±0.13 9.265±1.85 3.777±0.00 25.976±0.44
ENSMUST00000170273 4.518±0.71 6.207±1.73 N/A 7.839±2.30 5.785±1.57 4.917±0.33 N/A 5.814±2.27 6.375±4.38 5.194±0.75 N/A 10.077±3.30 2.879±0.26 19.158±4.79
ENSMUST00000170366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.639±0.00
ENSMUST00000170401 3.140±0.00 N/A 1.396±0.00 5.933±0.18 1.991±0.34 N/A N/A N/A 2.581±1.42 2.256±0.17 N/A 3.081±1.39 1.451±0.18 N/A
ENSMUST00000170996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041617 ENSMUST00000056962 N/A N/A 0.127±0.00 0.353±0.07 0.117±0.00 N/A 0.098±0.01 N/A 0.283±0.07 1.201±0.51 0.158±0.05 1.648±0.74 0.099±0.06 32.880±13.21
ENSMUST00000182117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A
ENSMUST00000182344 N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A
ENSMUST00000182368 N/A 0.172±0.00 N/A N/A 0.388±0.10 0.365±0.00 N/A 0.090±0.00 0.063±0.00 N/A 0.078±0.00 1.216±0.36 0.767±0.00 N/A
ENSMUST00000182526 N/A N/A N/A N/A N/A N/A 0.936±0.00 0.460±0.15 N/A N/A 0.214±0.04 N/A 1.806±0.00 N/A
ENSMUST00000182671 N/A N/A 0.278±0.00 0.844±0.10 0.245±0.04 N/A N/A 0.141±0.12 0.303±0.23 N/A 0.157±0.03 2.372±0.00 0.348±0.15 N/A
ENSMUST00000182822 0.585±0.00 0.212±0.08 0.191±0.00 0.762±0.08 0.347±0.03 N/A N/A 0.066±0.02 0.312±0.08 N/A 0.148±0.03 1.348±0.42 0.230±0.08 11.845±5.08
ENSMUST00000182976 N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000183101 N/A N/A 0.179±0.00 1.340±0.09 0.289±0.00 N/A 0.314±0.00 0.060±0.00 0.373±0.20 N/A 0.293±0.06 2.926±0.00 0.252±0.10 N/A
ENSMUST00000183279 N/A N/A 0.344±0.00 0.610±0.00 N/A N/A N/A 0.145±0.09 0.552±0.18 1.452±0.00 0.287±0.00 1.289±0.00 0.253±0.06 N/A

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