C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and coiled-coil domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045473 Tmcc2-001 ENSMUSG00000042066 10090 - 1:132356315-132391281 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045473 4.401±0.99 3.415±1.37 3.291±0.99 32.493±19.65 7.347±1.33 3.217±0.93 6.346±1.50 2.187±0.54 0.764±0.02 17.087±1.65 18.331±4.31 5.068±2.54 1.351±0.68 0.714±0.24

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086434 tmcc2-001 protein_coding Danio_rerio 0 499
ENSDART00000067639 TMCC1 (2 of 2)-201 protein_coding Danio_rerio 0 268
ENST00000329800 TMCC2-003 protein_coding Homo_sapiens 0 1755
ENST00000330675 TMCC2-004 protein_coding Homo_sapiens 0 1757
ENST00000358024 TMCC2-001 protein_coding Homo_sapiens 0 2686
ENST00000468846 TMCC2-007 processed_transcript Homo_sapiens 0 649
ENST00000481950 TMCC2-006 processed_transcript Homo_sapiens 0 1755
ENST00000495538 TMCC2-002 processed_transcript Homo_sapiens 0 2326
ENST00000545499 TMCC2-201 protein_coding Homo_sapiens 0 2322

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