C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear transport factor 2-like export factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042271 Nxt2 10090 + X:142226770-142239692 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042329 Nxt2-002 142227937-142239692 protein_coding
  ENSMUST00000112913 Nxt2-004 142228703-142239692 protein_coding
  ENSMUST00000112914 Nxt2-001 142228177-142239692 protein_coding
  ENSMUST00000112916 Nxt2-003 142226770-142239692 protein_coding
  ENSMUST00000138877 Nxt2-005 142228227-142229804 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042329ENSMUST00000112913ENSMUST00000112914ENSMUST00000112916ENSMUST00000138877
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042329 N/A N/A N/A 1.315±0.39 2.083±0.00 0.426±0.00 N/A 2.362±0.64 0.696±0.26 N/A 0.585±0.00 1.275±0.52 0.498±0.26 0.183±0.00
ENSMUST00000112913 N/A N/A N/A 2.313±0.00 1.108±0.00 N/A N/A N/A N/A N/A 0.152±0.05 0.769±0.51 0.137±0.01 0.221±0.00
ENSMUST00000112914 4.289±0.21 1.939±0.65 7.006±0.11 2.982±0.02 2.645±0.75 2.599±0.64 1.819±0.20 9.420±2.00 4.414±2.01 4.947±0.24 0.781±0.11 1.298±0.78 1.383±0.21 1.304±0.27
ENSMUST00000112916 N/A N/A N/A N/A 0.735±0.00 N/A 0.216±0.00 N/A N/A N/A N/A N/A 0.445±0.16 0.206±0.13
ENSMUST00000138877 N/A 1.251±0.50 N/A N/A N/A 1.634±0.35 1.958±0.00 7.115±0.23 3.568±0.00 N/A N/A 1.062±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JK CIL_0006JK_0002 CGP X:142081160-142239692
CIL_0007A1 CIL_0007A1_0002 CGP X:142226770-142306294

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061527 nxt2 nuclear transport factor 2-like export factor 2 protein_coding Danio_rerio
ENSG00000101888 NXT2 nuclear transport factor 2-like export factor 2 protein_coding Homo_sapiens

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