C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transport factor 2-like export factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042329 Nxt2-002 ENSMUSG00000042271 10090 + X:142227937-142239692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000042329
Transcript ID Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000042329 1.315±0.39 2.083±0.00 0.426±0.00 2.362±0.64 0.696±0.26 0.585±0.00 1.275±0.52 0.498±0.26 0.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JK CIL_0006JK_0002 CGP X:142081160-142239692
CIL_0007A1 CIL_0007A1_0002 CGP X:142226770-142306294

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218004 NXT2-001 protein_coding Homo_sapiens 0 682
ENST00000372103 NXT2-003 protein_coding Homo_sapiens 0 682
ENST00000372106 NXT2-002 protein_coding Homo_sapiens 0 682
ENST00000372107 NXT2-004 protein_coding Homo_sapiens 0 664

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