C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007A1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101888-ENSG00000176076 CGP 9606 X:109535781-109625172
GeneTranscriptPositionBiotype
ENSG00000101888 (NXT2)
nuclear transport factor 2-like export factor 2 		ENST00000218004 (NXT2-001) 109535781-109544684 protein_coding
ENST00000372103 (NXT2-003) 109537118-109543206 protein_coding
ENST00000372106 (NXT2-002) 109536876-109544690 protein_coding
ENST00000372107 (NXT2-004) 109536664-109542974 protein_coding
ENSG00000233874 (RP1-136J15.5)
 ENST00000440201 (RP1-136J15.5-001) 109568478-109570289 processed_pseudogene
CIL_0007A1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042271-ENSMUSG00000090122 CGP 10090 X:142226770-142306294
GeneTranscriptPositionBiotype
ENSMUSG00000042271 (Nxt2)
nuclear transport factor 2-like export factor 2 		ENSMUST00000042329 (Nxt2-002) 142227937-142239692 protein_coding
ENSMUST00000112913 (Nxt2-004) 142228703-142239692 protein_coding
ENSMUST00000112914 (Nxt2-001) 142228177-142239692 protein_coding
ENSMUST00000112916 (Nxt2-003) 142226770-142239692 protein_coding
ENSMUST00000138877 (Nxt2-005) 142228227-142229804 retained_intron
ENSMUSG00000083311 (Gm5643)
predicted gene 5643 		ENSMUST00000117081 (Gm5643-001) 142297565-142298530 processed_pseudogene
ENSMUSG00000090122 (Kcne1l)
potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene 		ENSMUST00000134825 (Kcne1l-001) 142304752-142306294 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A1_0001ENSG00000101888ENST00000218004ENST00000372103ENST00000372106ENST00000372107ENSG00000233874ENST00000440201CIL_0007A1_0002ENSMUSG00000042271ENSMUST00000042329ENSMUST00000112913ENSMUST00000112914ENSMUST00000112916ENSMUST00000138877ENSMUSG00000083311ENSMUST00000117081ENSMUSG00000090122ENSMUST00000134825
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A1_0001ENSG00000101888ENST00000218004ENST00000372103ENST00000372106ENST00000372107ENSG00000233874ENST00000440201CIL_0007A1_0002ENSMUSG00000042271ENSMUST00000042329ENSMUST00000112913ENSMUST00000112914ENSMUST00000112916ENSMUST00000138877ENSMUSG00000083311ENSMUST00000117081ENSMUSG00000090122ENSMUST00000134825
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101888 ENST00000218004 N/A N/A N/A N/A N/A N/A N/A N/A 0.702±0.00 N/A N/A N/A 1.313±0.00 4.601±1.42
ENST00000372103 N/A N/A 0.247±0.00 0.523±0.00 1.332±0.00 0.311±0.00 0.542±0.00 1.883±0.00 0.922±0.00 N/A N/A 3.334±0.00 4.475±0.00 N/A
ENST00000372106 0.515±0.00 1.759±0.00 0.153±0.00 0.412±0.03 1.136±0.36 0.295±0.00 0.437±0.00 1.073±0.55 1.201±0.00 1.416±0.39 0.206±0.16 1.726±1.22 2.068±1.36 6.559±1.67
ENST00000372107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.981±0.00
ENSG00000233874 ENST00000440201 0.006±0.00 N/A N/A 0.006±0.00 N/A 0.005±0.00 N/A N/A N/A N/A N/A 0.009±0.00 N/A 0.010±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042271 ENSMUST00000042329 N/A N/A N/A 1.315±0.39 2.083±0.00 0.426±0.00 N/A 2.362±0.64 0.696±0.26 N/A 0.585±0.00 1.275±0.52 0.498±0.26 0.183±0.00
ENSMUST00000112913 N/A N/A N/A 2.313±0.00 1.108±0.00 N/A N/A N/A N/A N/A 0.152±0.05 0.769±0.51 0.137±0.01 0.221±0.00
ENSMUST00000112914 4.289±0.21 1.939±0.65 7.006±0.11 2.982±0.02 2.645±0.75 2.599±0.64 1.819±0.20 9.420±2.00 4.414±2.01 4.947±0.24 0.781±0.11 1.298±0.78 1.383±0.21 1.304±0.27
ENSMUST00000112916 N/A N/A N/A N/A 0.735±0.00 N/A 0.216±0.00 N/A N/A N/A N/A N/A 0.445±0.16 0.206±0.13
ENSMUST00000138877 N/A 1.251±0.50 N/A N/A N/A 1.634±0.35 1.958±0.00 7.115±0.23 3.568±0.00 N/A N/A 1.062±0.00 N/A N/A
ENSMUSG00000083311 ENSMUST00000117081 N/A N/A 0.045±0.02 0.031±0.00 N/A N/A 0.053±0.00 N/A 0.080±0.03 N/A 0.149±0.06 0.203±0.03 0.149±0.23 0.040±0.00
ENSMUSG00000090122 ENSMUST00000134825 2.191±1.38 0.216±0.11 0.426±0.01 7.462±4.79 1.319±0.61 0.361±0.10 0.317±0.10 2.309±0.38 0.359±0.28 0.104±0.05 0.559±0.08 1.193±0.50 0.203±0.16 0.037±0.03

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