C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prospero homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042320 Prox2 10090 - 12:85086385-85106431 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110249 Prox2-001 85086814-85106431 protein_coding
  ENSMUST00000177289 Prox2-002 85086385-85097081 protein_coding
  ENSMUST00000191324 Prox2-003 85094023-85095615 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110249ENSMUST00000177289ENSMUST00000191324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110249 0.466±0.09 0.385±0.13 0.265±0.03 N/A 0.256±0.00 0.271±0.01 0.141±0.04 0.361±0.19 0.240±0.12 0.275±0.10 0.152±0.05 0.661±0.31 0.157±0.04 N/A
ENSMUST00000177289 0.549±0.05 0.430±0.25 0.821±0.01 0.995±0.00 0.601±0.28 0.394±0.05 0.213±0.06 0.357±0.18 0.291±0.09 0.791±0.00 0.315±0.11 0.693±0.21 0.259±0.04 3.634±2.48
ENSMUST00000191324 0.477±0.20 0.709±0.20 N/A N/A 0.808±0.14 0.463±0.19 0.141±0.02 0.258±0.06 0.278±0.01 0.349±0.05 N/A 0.898±0.40 N/A 7.517±5.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U2 CIL_0003U2_0002 CGP 12:84996321-85106431
CIL_0004KC CIL_0004KC_0003 CGP 12:85086385-85134091

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041952 prox2 prospero homeobox 2 protein_coding Danio_rerio
ENSG00000119608 PROX2 prospero homeobox 2 protein_coding Homo_sapiens

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