C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alkylglycerone phosphate synthase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042410 Agps 10090 + 2:75832177-75931350 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047232 Agps-001 75832177-75931350 protein_coding
  ENSMUST00000111952 Agps-002 75832189-75895208 protein_coding
  ENSMUST00000175646 Agps-007 75832505-75926078 protein_coding
  ENSMUST00000176056 Agps-003 75868383-75877963 protein_coding
  ENSMUST00000176626 Agps-004 75873956-75891793 processed_transcript
  ENSMUST00000176973 Agps-006 75894109-75926148 nonsense_mediated_decay
  ENSMUST00000177204 Agps-005 75909171-75911669 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047232ENSMUST00000111952ENSMUST00000175646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047232 4.093±1.79 3.163±1.03 3.150±0.46 5.963±3.01 26.699±9.35 5.615±1.43 2.440±0.73 10.297±1.42 3.476±1.96 10.032±1.25 2.434±0.31 4.824±2.15 9.124±3.67 0.786±0.46
ENSMUST00000111952 N/A 6.857±0.00 N/A N/A N/A 6.224±2.99 N/A N/A N/A N/A N/A 7.475±5.13 N/A N/A
ENSMUST00000175646 N/A N/A N/A 3.774±0.00 N/A N/A N/A N/A N/A N/A 1.114±0.00 5.537±1.67 17.473±4.64 1.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017Q CIL_00017Q_0002 CGP 2:75675513-75931350
CIL_00017H CIL_00017H_0002 CGP 2:75832177-75938585

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0005777 IEA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0008609 ISS alkylglycerone-phosphate synthase activity
GO:0008610 IEA lipid biosynthetic process
GO:0008611 ISS ether lipid biosynthetic process
GO:0008762 IEA UDP-N-acetylmuramate dehydrogenase activity
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042821 agps alkylglycerone phosphate synthase protein_coding Danio_rerio
ENSG00000018510 AGPS alkylglycerone phosphate synthase protein_coding Homo_sapiens

Loading