C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkylglycerone phosphate synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047232 Agps-001 ENSMUSG00000042410 10090 + 2:75832177-75931350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047232
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047232 4.093±1.79 3.163±1.03 3.150±0.46 5.963±3.01 26.699±9.35 5.615±1.43 2.440±0.73 10.297±1.42 3.476±1.96 10.032±1.25 2.434±0.31 4.824±2.15 9.124±3.67 0.786±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017Q CIL_00017Q_0002 CGP 2:75675513-75931350
CIL_00017H CIL_00017H_0002 CGP 2:75832177-75938585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IEA nucleolus
GO:0005739 IDA mitochondrion
GO:0005777 IEA peroxisome
GO:0005778 IEA peroxisomal membrane
GO:0008609 ISS alkylglycerone-phosphate synthase activity
GO:0008610 IEA lipid biosynthetic process
GO:0008611 ISS ether lipid biosynthetic process
GO:0008762 IEA UDP-N-acetylmuramate dehydrogenase activity
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264167 AGPS-001 protein_coding Homo_sapiens 0 3363
ENST00000409888 AGPS-002 protein_coding Homo_sapiens 0 429
ENST00000460342 AGPS-003 retained_intron Homo_sapiens 0 228

Loading