C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116044-ENSG00000018510 CGP 9606 2:177227595-177543836
GeneTranscriptPositionBiotype
ENSG00000018510 (AGPS)
alkylglycerone phosphate synthase 		ENST00000264167 (AGPS-001) 177392644-177543836 protein_coding
ENST00000409888 (AGPS-002) 177392768-177538418 protein_coding
ENST00000460342 (AGPS-003) 177436984-177441469 retained_intron
ENSG00000116044 (NFE2L2)
nuclear factor, erythroid 2-like 2 		ENST00000397062 (NFE2L2-001) 177230305-177265131 protein_coding
ENST00000397063 (NFE2L2-002) 177230305-177263800 protein_coding
ENST00000421929 (NFE2L2-009) 177231851-177263800 protein_coding
ENST00000423513 (NFE2L2-006) 177232277-177263454 protein_coding
ENST00000430047 (NFE2L2-010) 177231790-177264823 protein_coding
ENST00000446151 (NFE2L2-008) 177230308-177263572 protein_coding
ENST00000448782 (NFE2L2-013) 177231714-177263567 protein_coding
ENST00000449627 (NFE2L2-012) 177230990-177263511 protein_coding
ENST00000458603 (NFE2L2-014) 177227595-177232487 protein_coding
ENST00000462023 (NFE2L2-011) 177233879-177264659 retained_intron
ENST00000464747 (NFE2L2-003) 177230308-177392697 protein_coding
ENST00000477534 (NFE2L2-007) 177233477-177263537 retained_intron
ENST00000586532 (NFE2L2-016) 177231805-177311277 protein_coding
ENST00000588123 (NFE2L2-015) 177232499-177287777 protein_coding
ENSG00000225808 (DNAJC19P5)
DnaJ (Hsp40) homolog, subfamily C, member 19 pseudogene 5 		ENST00000443295 (DNAJC19P5-001) 177229191-177229506 processed_pseudogene
ENSG00000237178 (AC019080.1)
 ENST00000453859 (AC019080.1-001) 177344443-177344836 processed_pseudogene
ENSG00000238295 (snoU13)
Small nucleolar RNA U13 		ENST00000459157 (snoU13.1-201) 177345858-177345961 snoRNA
ENSG00000265396 (MIR3128)
microRNA 3128 		ENST00000581957 (MIR3128-201) 177255945-177256010 miRNA
ENSG00000271825 (RP11-337N6.2)
 ENST00000606180 (RP11-337N6.2-001) 177300600-177302006 antisense
ENSG00000271996 (RP11-337N6.1)
 ENST00000606200 (RP11-337N6.1-001) 177306373-177310572 antisense
ENSG00000280374 (RP11-337N6.3)
 ENST00000624891 (RP11-337N6.3-001) 177317715-177318471 sense_intronic
CIL_00017Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015839-ENSMUSG00000042410 CGP 10090 2:75675513-75931350
GeneTranscriptPositionBiotype
ENSMUSG00000015839 (Nfe2l2)
nuclear factor, erythroid derived 2, like 2 		ENSMUST00000102672 (Nfe2l2-001) 75675513-75704641 protein_coding
ENSMUST00000152371 (Nfe2l2-002) 75691052-75704489 processed_transcript
ENSMUSG00000042410 (Agps)
alkylglycerone phosphate synthase 		ENSMUST00000047232 (Agps-001) 75832177-75931350 protein_coding
ENSMUST00000111952 (Agps-002) 75832189-75895208 protein_coding
ENSMUST00000175646 (Agps-007) 75832505-75926078 protein_coding
ENSMUST00000176056 (Agps-003) 75868383-75877963 protein_coding
ENSMUST00000176626 (Agps-004) 75873956-75891793 processed_transcript
ENSMUST00000176973 (Agps-006) 75894109-75926148 nonsense_mediated_decay
ENSMUST00000177204 (Agps-005) 75909171-75911669 retained_intron
ENSMUSG00000081833 (Gm13669)
predicted gene 13669 		ENSMUST00000122366 (Gm13669-001) 75808358-75808814 processed_pseudogene
ENSMUSG00000082187 (Gm13670)
predicted gene 13670 		ENSMUST00000120947 (Gm13670-001) 75822028-75822793 processed_pseudogene
ENSMUSG00000086813 (Gm13657)
predicted gene 13657 		ENSMUST00000135682 (Gm13657-001) 75777188-75782306 processed_transcript
ENSMUSG00000087222 (E030042O20Rik)
RIKEN cDNA E030042O20 gene 		ENSMUST00000135244 (E030042O20Rik-001) 75704770-75710024 processed_transcript
ENSMUSG00000087527 (Gm13656)
predicted gene 13656 		ENSMUST00000123829 (Gm13656-001) 75729592-75730172 lincRNA
ENSMUSG00000089015 (Gm24996)
predicted gene, 24996 		ENSMUST00000158390 (Gm24996-201) 75686740-75686838 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017Q_0001ENSG00000018510ENST00000264167ENST00000409888ENST00000460342ENSG00000116044ENST00000397062ENST00000397063ENST00000421929ENST00000423513ENST00000430047ENST00000446151ENST00000448782ENST00000449627ENST00000458603ENST00000462023ENST00000464747ENST00000477534ENST00000586532ENST00000588123ENSG00000225808ENST00000443295ENSG00000237178ENST00000453859ENSG00000238295ENST00000459157ENSG00000265396ENST00000581957ENSG00000271825ENST00000606180ENSG00000271996ENST00000606200ENSG00000280374ENST00000624891CIL_00017Q_0002ENSMUSG00000015839ENSMUST00000102672ENSMUST00000152371ENSMUSG00000042410ENSMUST00000047232ENSMUST00000111952ENSMUST00000175646ENSMUST00000176056ENSMUST00000176626ENSMUST00000176973ENSMUST00000177204ENSMUSG00000081833ENSMUST00000122366ENSMUSG00000082187ENSMUST00000120947ENSMUSG00000086813ENSMUST00000135682ENSMUSG00000087222ENSMUST00000135244ENSMUSG00000087527ENSMUST00000123829ENSMUSG00000089015ENSMUST00000158390
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017Q_0001ENSG00000018510ENST00000264167ENSG00000116044ENST00000397062ENST00000397063ENST00000446151ENST00000449627ENSG00000225808ENST00000443295ENSG00000237178ENST00000453859ENSG00000238295ENST00000459157ENSG00000265396ENST00000581957ENSG00000271825ENST00000606180ENSG00000271996ENST00000606200ENSG00000280374ENST00000624891CIL_00017Q_0002ENSMUSG00000015839ENSMUST00000102672ENSMUSG00000042410ENSMUST00000047232ENSMUST00000111952ENSMUST00000175646ENSMUSG00000081833ENSMUST00000122366ENSMUSG00000082187ENSMUST00000120947ENSMUSG00000086813ENSMUST00000135682ENSMUSG00000087222ENSMUST00000135244ENSMUSG00000087527ENSMUST00000123829ENSMUSG00000089015ENSMUST00000158390
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000018510 ENST00000264167 5.859±0.00 3.802±0.00 2.884±0.00 3.083±0.62 3.971±1.99 6.287±0.82 2.707±0.31 4.347±0.82 4.572±1.97 2.517±0.00 1.894±1.15 5.887±2.08 3.951±0.96 4.685±0.95
ENST00000409888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116044 ENST00000397062 15.151±0.00 11.877±0.00 4.626±0.00 10.934±0.00 N/A 4.474±0.00 13.006±0.00 18.022±11.26 10.055±5.42 17.280±12.95 3.825±1.78 23.486±17.53 15.465±6.34 21.092±4.40
ENST00000397063 11.019±0.00 N/A N/A 6.657±1.58 3.461±0.00 3.922±0.00 3.945±0.00 16.002±0.00 5.704±0.00 11.191±0.00 N/A 17.034±6.38 N/A 12.108±0.00
ENST00000421929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446151 N/A N/A N/A N/A N/A N/A 4.044±0.00 N/A N/A N/A 0.952±0.00 N/A N/A N/A
ENST00000448782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.151±0.00 29.337±0.00 26.768±0.00
ENST00000458603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225808 ENST00000443295 1.349±0.00 N/A 0.986±0.00 1.176±0.59 0.844±0.07 1.644±1.49 0.803±0.72 1.635±0.11 1.759±1.61 4.204±0.38 0.726±0.00 1.982±1.24 0.254±0.09 0.536±0.08
ENSG00000237178 ENST00000453859 N/A 0.164±0.00 N/A 0.666±0.00 1.468±0.00 N/A N/A 0.393±0.00 N/A N/A N/A N/A 0.168±0.00 N/A
ENSG00000238295 ENST00000459157 N/A 0.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265396 ENST00000581957 N/A N/A N/A N/A N/A N/A 0.431±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000271825 ENST00000606180 0.216±0.00 0.752±0.00 5.014±0.00 0.679±0.00 0.425±0.00 0.385±0.00 0.072±0.00 0.215±0.00 0.021±0.00 0.078±0.00 N/A 0.129±0.00 0.274±0.13 0.434±0.00
ENSG00000271996 ENST00000606200 0.069±0.00 0.223±0.00 N/A 0.330±0.00 0.301±0.00 0.631±0.00 0.284±0.22 0.419±0.00 0.342±0.00 0.074±0.00 0.020±0.00 0.193±0.03 0.079±0.00 0.083±0.00
ENSG00000280374 ENST00000624891 0.306±0.00 0.191±0.00 N/A 0.100±0.05 0.626±0.00 0.124±0.00 0.091±0.05 0.340±0.00 0.158±0.03 0.430±0.15 N/A 0.420±0.36 0.420±0.12 0.289±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015839 ENSMUST00000102672 27.187±7.68 37.009±1.87 75.799±5.16 4.052±0.35 29.515±5.34 50.956±5.48 17.719±1.10 30.162±3.45 24.965±3.95 46.926±7.86 11.254±0.95 49.103±7.39 22.729±4.11 6.558±1.34
ENSMUST00000152371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042410 ENSMUST00000047232 4.093±1.79 3.163±1.03 3.150±0.46 5.963±3.01 26.699±9.35 5.615±1.43 2.440±0.73 10.297±1.42 3.476±1.96 10.032±1.25 2.434±0.31 4.824±2.15 9.124±3.67 0.786±0.46
ENSMUST00000111952 N/A 6.857±0.00 N/A N/A N/A 6.224±2.99 N/A N/A N/A N/A N/A 7.475±5.13 N/A N/A
ENSMUST00000175646 N/A N/A N/A 3.774±0.00 N/A N/A N/A N/A N/A N/A 1.114±0.00 5.537±1.67 17.473±4.64 1.520±0.00
ENSMUST00000176056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081833 ENSMUST00000122366 0.385±0.28 N/A 0.166±0.02 0.115±0.00 0.496±0.31 N/A 0.162±0.00 0.361±0.15 0.165±0.10 0.258±0.03 N/A 0.502±0.38 0.551±0.00 0.215±0.09
ENSMUSG00000082187 ENSMUST00000120947 N/A N/A N/A 0.289±0.07 N/A N/A 0.123±0.00 N/A 0.121±0.09 0.162±0.00 N/A 0.118±0.03 0.110±0.06 0.314±0.21
ENSMUSG00000086813 ENSMUST00000135682 0.028±0.01 0.107±0.06 0.919±0.33 0.020±0.00 0.142±0.05 0.557±0.24 0.187±0.10 0.061±0.03 0.277±0.14 0.203±0.07 0.031±0.02 0.205±0.11 0.024±0.01 0.058±0.02
ENSMUSG00000087222 ENSMUST00000135244 0.781±0.59 2.480±0.30 1.189±0.30 0.194±0.12 1.430±0.91 2.369±0.70 0.526±0.11 0.780±0.22 1.031±0.63 1.155±0.03 0.468±0.17 1.261±0.58 0.213±0.11 0.670±0.33
ENSMUSG00000087527 ENSMUST00000123829 N/A N/A N/A N/A 0.253±0.00 N/A 0.167±0.01 N/A N/A N/A 0.254±0.02 N/A N/A N/A
ENSMUSG00000089015 ENSMUST00000158390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 131.312±0.00 N/A

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