C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA D330045A20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042498 D330045A20Rik 10090 + X:139480367-139554582 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046763 D330045A20Rik-001 139480367-139554582 protein_coding
  ENSMUST00000113030 D330045A20Rik-002 139480371-139554582 protein_coding
  ENSMUST00000125750 D330045A20Rik-003 139480371-139495133 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046763ENSMUST00000113030ENSMUST00000125750
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046763 0.193±0.21 N/A 0.428±0.29 0.053±0.03 0.022±0.00 N/A 0.009±0.00 N/A 0.136±0.08 0.020±0.00 0.013±0.01 0.139±0.09 0.048±0.05 0.198±0.03
ENSMUST00000113030 0.121±0.16 0.056±0.00 0.546±0.00 0.079±0.06 0.043±0.02 0.494±0.07 0.010±0.01 0.624±0.13 0.209±0.15 0.075±0.04 0.008±0.00 0.236±0.13 0.033±0.02 0.183±0.03
ENSMUST00000125750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.316±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A1 CIL_0006A1_0002 CGP X:139480367-139673145

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010331 C5HXorf57 chromosome X open reading frame 57 protein_coding Danio_rerio
ENSG00000147231 CXorf57 chromosome X open reading frame 57 protein_coding Homo_sapiens

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