C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA D330045A20 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113030 D330045A20Rik-002 ENSMUSG00000042498 10090 + X:139480371-139554582 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113030 0.121±0.16 0.056±0.00 0.546±0.00 0.079±0.06 0.043±0.02 0.494±0.07 0.010±0.01 0.624±0.13 0.209±0.15 0.075±0.04 0.008±0.00 0.236±0.13 0.033±0.02 0.183±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A1 CIL_0006A1_0002 CGP X:139480367-139673145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372544 CXorf57-201 protein_coding Homo_sapiens 0 1447
ENST00000372548 CXorf57-002 protein_coding Homo_sapiens 0 2266
ENST00000421550 CXorf57-003 protein_coding Homo_sapiens 0 867
ENST00000461251 CXorf57-001 nonsense_mediated_decay Homo_sapiens 0 1574
ENST00000478395 CXorf57-004 processed_transcript Homo_sapiens 0 215
ENST00000497124 CXorf57-005 processed_transcript Homo_sapiens 0 298

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