C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0006A1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147231-ENSG00000133135 CGP 9606 X:106611930-106796993
GeneTranscriptPositionBiotype
ENSG00000133135 (RNF128)
ring finger protein 128, E3 ubiquitin protein ligase
ENST00000255499 (RNF128-001) 106726664-106796993 protein_coding
ENST00000324342 (RNF128-002) 106693838-106796993 protein_coding
ENST00000418562 (RNF128-003) 106693794-106790205 protein_coding
ENSG00000147231 (CXorf57)
chromosome X open reading frame 57
ENST00000372544 (CXorf57-201) 106611930-106679437 protein_coding
ENST00000372548 (CXorf57-002) 106611972-106679442 protein_coding
ENST00000421550 (CXorf57-003) 106612657-106679437 protein_coding
ENST00000461251 (CXorf57-001) 106611975-106638678 nonsense_mediated_decay
ENST00000478395 (CXorf57-004) 106639294-106640582 processed_transcript
ENST00000497124 (CXorf57-005) 106640455-106669212 processed_transcript
ENSG00000263515 (MIR548AN)
microRNA 548an
ENST00000408286 (MIR548AN-201) 106639814-106639896 miRNA
CIL_0006A1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042498-ENSMUSG00000031438 CGP 10090 X:139480367-139673145
GeneTranscriptPositionBiotype
ENSMUSG00000031438 (Rnf128)
ring finger protein 128
ENSMUST00000113026 (Rnf128-001) 139610620-139673145 protein_coding
ENSMUST00000113027 (Rnf128-003) 139563316-139673138 protein_coding
ENSMUST00000113029 (Rnf128-002) 139611367-139671741 processed_transcript
ENSMUSG00000042498 (D330045A20Rik)
RIKEN cDNA D330045A20 gene
ENSMUST00000046763 (D330045A20Rik-001) 139480367-139554582 protein_coding
ENSMUST00000113030 (D330045A20Rik-002) 139480371-139554582 protein_coding
ENSMUST00000125750 (D330045A20Rik-003) 139480371-139495133 processed_transcript
ENSMUSG00000084645 (Gm24380)
predicted gene, 24380
ENSMUST00000122696 (Gm24380-201) 139654294-139654617 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006A1_0001ENSG00000133135ENST00000255499ENST00000324342ENST00000418562ENSG00000147231ENST00000372544ENST00000372548ENST00000421550ENST00000461251ENST00000478395ENST00000497124ENSG00000263515ENST00000408286CIL_0006A1_0002ENSMUSG00000031438ENSMUST00000113026ENSMUST00000113027ENSMUST00000113029ENSMUSG00000042498ENSMUST00000046763ENSMUST00000113030ENSMUST00000125750ENSMUSG00000084645ENSMUST00000122696
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006A1_0001ENSG00000133135ENST00000255499ENST00000418562ENSG00000147231ENST00000372544ENST00000372548ENST00000421550ENST00000461251ENST00000497124ENSG00000263515ENST00000408286CIL_0006A1_0002ENSMUSG00000031438ENSMUST00000113026ENSMUST00000113027ENSMUST00000113029ENSMUSG00000042498ENSMUST00000046763ENSMUST00000113030ENSMUST00000125750ENSMUSG00000084645ENSMUST00000122696
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133135 ENST00000255499 0.083±0.00 0.059±0.00 4.877±0.00 1.559±0.04 0.463±0.34 4.933±2.79 0.128±0.01 17.027±2.46 7.611±5.81 3.097±0.65 1.152±0.39 3.244±2.27 6.714±0.25 0.472±0.29
ENST00000324342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418562 N/A N/A N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A N/A 6.734±0.00 11.909±0.00 0.449±0.00
ENSG00000147231 ENST00000372544 N/A 0.224±0.00 N/A N/A N/A N/A N/A 0.356±0.00 0.048±0.00 0.625±0.00 N/A 0.293±0.20 0.372±0.00 N/A
ENST00000372548 0.087±0.00 N/A 0.368±0.00 1.420±0.43 0.063±0.00 0.261±0.00 0.025±0.00 0.470±0.46 0.210±0.00 0.146±0.00 N/A 0.646±0.64 0.808±0.52 1.541±0.14
ENST00000421550 0.173±0.00 N/A N/A N/A 0.055±0.00 0.130±0.00 0.067±0.00 N/A N/A N/A N/A 0.049±0.01 N/A N/A
ENST00000461251 0.114±0.00 0.167±0.00 N/A N/A 0.142±0.08 0.362±0.00 0.179±0.14 N/A N/A N/A 0.172±0.00 N/A N/A N/A
ENST00000478395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497124 0.406±0.00 N/A 1.942±0.00 2.472±0.00 N/A 0.548±0.13 0.258±0.17 N/A 0.717±0.00 1.215±0.00 1.700±0.00 0.240±0.00 1.598±0.20 1.830±0.00
ENSG00000263515 ENST00000408286 N/A N/A N/A N/A 0.292±0.00 N/A N/A 0.881±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031438 ENSMUST00000113026 3.180±3.07 49.939±23.74 11.204±1.07 0.747±0.29 1.744±0.40 30.835±2.02 10.332±1.36 24.946±5.47 25.714±8.74 1.225±0.32 4.967±0.45 20.621±9.05 70.473±15.25 1.011±0.39
ENSMUST00000113027 7.485±5.37 N/A 31.385±6.05 N/A N/A N/A N/A N/A N/A 0.514±0.00 N/A 10.146±6.99 N/A 0.545±0.36
ENSMUST00000113029 N/A N/A N/A 2.080±0.00 0.496±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042498 ENSMUST00000046763 0.193±0.21 N/A 0.428±0.29 0.053±0.03 0.022±0.00 N/A 0.009±0.00 N/A 0.136±0.08 0.020±0.00 0.013±0.01 0.139±0.09 0.048±0.05 0.198±0.03
ENSMUST00000113030 0.121±0.16 0.056±0.00 0.546±0.00 0.079±0.06 0.043±0.02 0.494±0.07 0.010±0.01 0.624±0.13 0.209±0.15 0.075±0.04 0.008±0.00 0.236±0.13 0.033±0.02 0.183±0.03
ENSMUST00000125750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.316±0.00 N/A
ENSMUSG00000084645 ENSMUST00000122696 0.235±0.03 N/A N/A N/A N/A N/A N/A N/A 0.146±0.06 N/A N/A 0.887±0.12 0.524±0.22 N/A

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