C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 227, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042564 Fam227a 10090 - 15:79609576-79658956 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046816 Fam227a-003 79635305-79658956 retained_intron
  ENSMUST00000109646 Fam227a-201 79612371-79658749 protein_coding
  ENSMUST00000109648 Fam227a-202 79609576-79658956 protein_coding
  ENSMUST00000187519 Fam227a-002 79612317-79658793 protein_coding
  ENSMUST00000191401 Fam227a-001 79612371-79658793 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046816ENSMUST00000109646ENSMUST00000109648ENSMUST00000187519ENSMUST00000191401
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046816 0.088±0.04 N/A 0.088±0.01 0.083±0.04 0.058±0.00 0.145±0.07 0.048±0.02 N/A 0.033±0.01 0.187±0.07 N/A N/A
ENSMUST00000109646 0.091±0.01 2.525±0.00 0.189±0.00 0.128±0.00 0.166±0.03 0.150±0.01 0.079±0.03 0.465±0.00 0.094±0.04 1.009±0.82 0.246±0.15 6.596±6.21
ENSMUST00000109648 0.129±0.03 N/A 0.113±0.04 0.098±0.03 0.057±0.02 0.320±0.00 0.059±0.04 N/A 0.051±0.01 0.289±0.15 0.032±0.00 2.319±0.14
ENSMUST00000187519 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.29 N/A 6.174±2.75
ENSMUST00000191401 N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0005DL CIL_0005DL_0002 CGP 15:79561500-79658956
CIL_0005DM CIL_0005DM_0002 CGP 15:79609576-79667660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000184949 FAM227A family with sequence similarity 227, member A protein_coding Homo_sapiens

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