C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100206-ENSG00000184949 CGP 9606 22:38518949-38656629
GeneTranscriptPositionBiotype
ENSG00000100206 (DMC1)
DNA meiotic recombinase 1 		ENST00000216024 (DMC1-001) 38518949-38570286 protein_coding
ENST00000415483 (DMC1-003) 38552671-38568409 protein_coding
ENST00000428462 (DMC1-201) 38518949-38568409 protein_coding
ENST00000439567 (DMC1-005) 38538295-38570131 protein_coding
ENST00000464842 (DMC1-004) 38569284-38570204 processed_transcript
ENST00000478820 (DMC1-002) 38549498-38570184 retained_intron
ENST00000616615 (DMC1-202) 38545768-38570184 protein_coding
ENSG00000184949 (FAM227A)
family with sequence similarity 227, member A 		ENST00000355830 (FAM227A-001) 38582169-38656303 protein_coding
ENST00000424706 (FAM227A-003) 38636557-38656278 processed_transcript
ENST00000484582 (FAM227A-002) 38638772-38656281 retained_intron
ENST00000490082 (FAM227A-004) 38649945-38656362 retained_intron
ENST00000535113 (FAM227A-201) 38578120-38656629 protein_coding
ENST00000540952 (FAM227A-009) 38586024-38656629 processed_transcript
ENST00000541689 (FAM227A-012) 38597207-38636551 processed_transcript
ENST00000543295 (FAM227A-010) 38620216-38629002 processed_transcript
ENST00000543828 (FAM227A-005) 38582169-38586145 processed_transcript
ENST00000544346 (FAM227A-006) 38591434-38656303 processed_transcript
ENST00000608409 (FAM227A-011) 38636546-38653853 processed_transcript
ENSG00000224279 (RP1-199H16.6)
 ENST00000446147 (RP1-199H16.6-001) 38574931-38575431 processed_pseudogene
CIL_0005DL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022429-ENSMUSG00000042564 CGP 10090 15:79561500-79658956
GeneTranscriptPositionBiotype
ENSMUSG00000022429 (Dmc1)
DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination 		ENSMUST00000023065 (Dmc1-201) 79561500-79605084 protein_coding
ENSMUSG00000042564 (Fam227a)
family with sequence similarity 227, member A 		ENSMUST00000046816 (Fam227a-003) 79635305-79658956 retained_intron
ENSMUST00000109646 (Fam227a-201) 79612371-79658749 protein_coding
ENSMUST00000109648 (Fam227a-202) 79609576-79658956 protein_coding
ENSMUST00000187519 (Fam227a-002) 79612317-79658793 protein_coding
ENSMUST00000191401 (Fam227a-001) 79612371-79658793 nonsense_mediated_decay
ENSMUSG00000093223 (Gm27903)
predicted gene, 27903 		ENSMUST00000175482 (Gm27903-201) 79594668-79594793 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DL_0001ENSG00000100206ENST00000216024ENST00000415483ENST00000428462ENST00000439567ENST00000464842ENST00000478820ENST00000616615ENSG00000184949ENST00000355830ENST00000424706ENST00000484582ENST00000490082ENST00000535113ENST00000540952ENST00000541689ENST00000543295ENST00000543828ENST00000544346ENST00000608409ENSG00000224279ENST00000446147CIL_0005DL_0002ENSMUSG00000022429ENSMUST00000023065ENSMUSG00000042564ENSMUST00000046816ENSMUST00000109646ENSMUST00000109648ENSMUST00000187519ENSMUST00000191401ENSMUSG00000093223ENSMUST00000175482
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DL_0001ENSG00000100206ENST00000216024ENST00000415483ENST00000428462ENST00000439567ENST00000464842ENST00000616615ENSG00000184949ENST00000355830ENST00000484582ENST00000490082ENST00000535113ENST00000540952ENST00000541689ENST00000543295ENST00000544346ENST00000608409ENSG00000224279ENST00000446147CIL_0005DL_0002ENSMUSG00000022429ENSMUST00000023065ENSMUSG00000042564ENSMUST00000046816ENSMUST00000109646ENSMUST00000109648ENSMUST00000187519ENSMUST00000191401ENSMUSG00000093223ENSMUST00000175482
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100206 ENST00000216024 N/A N/A N/A 0.222±0.00 N/A 0.282±0.00 0.066±0.00 N/A N/A 0.059±0.00 N/A 0.169±0.00 0.228±0.01 3.350±2.47
ENST00000415483 N/A N/A N/A N/A 0.177±0.00 0.358±0.00 N/A N/A N/A 0.516±0.00 N/A N/A 0.630±0.00 8.015±0.00
ENST00000428462 0.211±0.00 0.102±0.00 0.021±0.00 N/A 0.060±0.04 N/A N/A 0.033±0.00 0.034±0.03 N/A 0.142±0.00 0.108±0.02 0.063±0.00 N/A
ENST00000439567 N/A N/A N/A 0.332±0.00 0.128±0.00 N/A N/A N/A 0.128±0.00 0.256±0.00 N/A 0.081±0.03 N/A 4.738±0.00
ENST00000464842 N/A N/A N/A N/A N/A N/A N/A 0.452±0.00 N/A 1.114±0.00 N/A 0.766±0.00 0.461±0.00 N/A
ENST00000478820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616615 0.254±0.00 0.510±0.00 N/A 0.253±0.00 0.265±0.00 N/A 0.141±0.00 0.193±0.00 0.018±0.00 0.138±0.00 0.070±0.00 0.067±0.05 N/A N/A
ENSG00000184949 ENST00000355830 N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A
ENST00000490082 N/A N/A 0.980±0.00 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 0.469±0.00 N/A N/A
ENST00000535113 0.079±0.00 0.199±0.00 N/A N/A N/A 0.044±0.02 0.049±0.04 0.030±0.00 0.030±0.01 N/A 0.019±0.00 N/A 0.016±0.00 N/A
ENST00000540952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.586±0.00
ENST00000541689 N/A N/A 0.697±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A
ENST00000543295 N/A N/A N/A N/A 1.384±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544346 N/A N/A N/A N/A 0.380±0.00 N/A N/A N/A N/A 0.290±0.00 N/A 0.371±0.00 N/A 6.239±0.00
ENST00000608409 N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 1.471±0.00 N/A N/A 0.067±0.00 N/A
ENSG00000224279 ENST00000446147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022429 ENSMUST00000023065 0.106±0.05 0.252±0.27 0.219±0.07 0.324±0.18 0.112±0.05 0.078±0.03 0.064±0.03 0.066±0.00 0.161±0.19 0.125±0.05 0.018±0.01 0.234±0.13 0.098±0.06 3.309±0.46
ENSMUSG00000042564 ENSMUST00000046816 N/A 0.088±0.04 N/A N/A 0.088±0.01 0.083±0.04 0.058±0.00 0.145±0.07 0.048±0.02 N/A 0.033±0.01 0.187±0.07 N/A N/A
ENSMUST00000109646 N/A 0.091±0.01 N/A 2.525±0.00 0.189±0.00 0.128±0.00 0.166±0.03 0.150±0.01 0.079±0.03 0.465±0.00 0.094±0.04 1.009±0.82 0.246±0.15 6.596±6.21
ENSMUST00000109648 N/A 0.129±0.03 N/A N/A 0.113±0.04 0.098±0.03 0.057±0.02 0.320±0.00 0.059±0.04 N/A 0.051±0.01 0.289±0.15 0.032±0.00 2.319±0.14
ENSMUST00000187519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.29 N/A 6.174±2.75
ENSMUST00000191401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A
ENSMUSG00000093223 ENSMUST00000175482 N/A N/A 19.455±0.00 11.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.130±0.00

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