C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin XV
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042678 Myo15 10090 + 11:60469339-60528369 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071880 Myo15-001 60469339-60528369 protein_coding
  ENSMUST00000081823 Myo15-004 60469339-60528369 protein_coding
  ENSMUST00000094135 Myo15-005 60469339-60528369 protein_coding
  ENSMUST00000122825 Myo15-003 60509534-60521986 retained_intron
  ENSMUST00000126522 Myo15-002 60479915-60509712 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071880ENSMUST00000081823ENSMUST00000094135ENSMUST00000122825ENSMUST00000126522
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071880 0.003±0.00 N/A N/A N/A N/A N/A N/A 0.003±0.00 0.015±0.00 0.025±0.00 0.004±0.00 N/A 0.018±0.00 0.468±0.00
ENSMUST00000081823 0.025±0.02 0.128±0.09 0.008±0.00 0.057±0.02 0.068±0.02 0.020±0.01 0.026±0.01 0.063±0.05 0.089±0.10 0.072±0.04 0.008±0.00 0.157±0.05 0.050±0.03 1.212±0.94
ENSMUST00000094135 0.008±0.01 0.021±0.01 0.009±0.00 0.003±0.00 0.009±0.00 N/A N/A 0.010±0.01 N/A 0.025±0.00 0.005±0.00 0.042±0.02 0.017±0.00 0.404±0.00
ENSMUST00000122825 0.066±0.04 N/A 0.010±0.00 0.033±0.00 0.029±0.00 0.027±0.00 N/A N/A 0.063±0.08 N/A N/A 0.190±0.09 0.045±0.02 N/A
ENSMUST00000126522 0.014±0.00 0.054±0.01 N/A N/A 0.033±0.00 0.008±0.00 0.005±0.00 0.018±0.00 N/A N/A 0.011±0.00 N/A 0.066±0.05 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E1 CIL_0000E1_0002 CGP 11:60454591-60528369
CIL_00058Q CIL_00058Q_0003 CGP 11:60469339-60558512

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0007605 IMP sensory perception of sound
GO:0007626 IMP locomotory behavior
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0032420 IDA stereocilium
GO:0032421 IDA stereocilium bundle
GO:0042472 IMP inner ear morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075292 myo15aa myosin XVAa protein_coding Danio_rerio
ENSDARG00000078474 myo15ab myosin XVAb protein_coding Danio_rerio
ENSG00000091536 MYO15A myosin XVA protein_coding Homo_sapiens

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