C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin XV
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122825 Myo15-003 ENSMUSG00000042678 10090 + 11:60509534-60521986 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverOvaryPlacentaENSMUST00000122825
Transcript ID Adipose Bladder Brain Breast Colon Liver Ovary Placenta
ENSMUST00000122825 0.066±0.04 0.010±0.00 0.033±0.00 0.029±0.00 0.027±0.00 0.063±0.08 0.190±0.09 0.045±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E1 CIL_0000E1_0002 CGP 11:60454591-60528369
CIL_00058Q CIL_00058Q_0003 CGP 11:60469339-60558512

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000205890 MYO15A-001 protein_coding Homo_sapiens 0 723
ENST00000418233 MYO15A-009 protein_coding Homo_sapiens 0 723
ENST00000433411 MYO15A-002 retained_intron Homo_sapiens 0 488
ENST00000445289 MYO15A-011 retained_intron Homo_sapiens 0 281
ENST00000473013 MYO15A-003 retained_intron Homo_sapiens 0 281
ENST00000557190 MYO15A-006 processed_transcript Homo_sapiens 2e-37 159
ENST00000578472 MYO15A-014 protein_coding Homo_sapiens 0 529
ENST00000578575 MYO15A-016 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000579848 MYO15A-010 protein_coding Homo_sapiens 0 283
ENST00000615845 MYO15A-201 protein_coding Homo_sapiens 0 723

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