C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selenoprotein K
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042682 Selk 10090 + 14:29968308-29975074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000112268 Selk-001 29968308-29975074 protein_coding
  ENSMUST00000133229 Selk-002 29968436-29973597 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112268ENSMUST00000133229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112268 17.661±1.37 6.241±1.15 29.820±5.83 32.657±12.87 13.039±2.78 11.188±0.97 17.982±0.45 20.829±3.69 34.718±29.43 22.712±0.80 21.183±5.15 19.505±7.47 23.554±6.62 27.397±9.56
ENSMUST00000133229 N/A N/A N/A 74.125±0.00 N/A N/A N/A N/A 16.674±8.14 N/A 13.906±2.79 91.232±0.00 51.814±29.67 53.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002V CIL_00002V_0002 CGP 14:29968308-29993221

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IEA plasma membrane
GO:0006816 IMP calcium ion transport
GO:0010742 IMP macrophage derived foam cell differentiation
GO:0016021 IEA integral component of membrane
GO:0018345 IMP protein palmitoylation
GO:0030335 IMP positive regulation of cell migration
GO:0042102 IMP positive regulation of T cell proliferation
GO:0045728 IMP respiratory burst after phagocytosis
GO:0051223 IMP regulation of protein transport
GO:2000406 IMP positive regulation of T cell migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045202 selk selenoprotein K protein_coding Danio_rerio
ENSG00000113811 SELK selenoprotein K protein_coding Homo_sapiens

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