C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 108
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042757 Tmem108 10090 - 9:103482947-103761837 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049452 Tmem108-003 103482947-103692807 protein_coding
  ENSMUST00000186455 Tmem108-002 103752250-103761790 retained_intron
  ENSMUST00000189066 Tmem108-004 103484436-103761794 protein_coding
  ENSMUST00000189588 Tmem108-001 103483778-103761837 protein_coding
  ENSMUST00000191069 Tmem108-005 103484439-103493611 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049452ENSMUST00000186455ENSMUST00000189066ENSMUST00000189588ENSMUST00000191069
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049452 0.073±0.00 0.531±0.12 0.055±0.00 1.274±0.64 0.061±0.02 N/A 0.374±0.00 N/A 0.067±0.02 0.405±0.06 N/A 0.510±0.34 N/A N/A
ENSMUST00000186455 N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A
ENSMUST00000189066 0.828±0.70 2.407±0.55 0.290±0.09 5.171±1.87 0.342±0.15 0.863±0.19 1.742±0.49 1.394±0.36 0.310±0.23 1.807±0.47 0.062±0.05 3.833±2.03 19.550±12.72 1.195±0.42
ENSMUST00000189588 0.327±0.22 0.623±0.22 0.095±0.00 1.677±0.63 0.125±0.05 0.197±0.02 0.667±0.20 0.573±0.27 0.155±0.07 0.957±0.32 0.047±0.00 0.949±0.41 2.124±0.74 0.322±0.24
ENSMUST00000191069 N/A N/A 0.033±0.00 N/A 0.121±0.04 N/A N/A 0.362±0.10 N/A N/A N/A 0.149±0.05 N/A 1.627±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z7 CIL_0007Z7_0002 VISTA 9:103379109-103979657

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090230 tmem108 transmembrane protein 108 protein_coding Danio_rerio
ENSG00000144868 TMEM108 transmembrane protein 108 protein_coding Homo_sapiens

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