C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 108
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189066 Tmem108-004 ENSMUSG00000042757 10090 - 9:103484436-103761794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000189066
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000189066 0.828±0.70 2.407±0.55 0.290±0.09 5.171±1.87 0.342±0.15 0.863±0.19 1.742±0.49 1.394±0.36 0.310±0.23 1.807±0.47 0.062±0.05 3.833±2.03 19.550±12.72 1.195±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z7 CIL_0007Z7_0002 VISTA 9:103379109-103979657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321871 TMEM108-001 protein_coding Homo_sapiens 0 1938
ENST00000393130 TMEM108-002 protein_coding Homo_sapiens 0 1951
ENST00000508711 TMEM108-003 protein_coding Homo_sapiens 0 684
ENST00000510183 TMEM108-012 protein_coding Homo_sapiens 0 388
ENST00000511388 TMEM108-005 retained_intron Homo_sapiens 0 1663
ENST00000511555 TMEM108-010 protein_coding Homo_sapiens 0 270
ENST00000512137 TMEM108-008 protein_coding Homo_sapiens 0 436
ENST00000512662 TMEM108-009 protein_coding Homo_sapiens 4e-31 139
ENST00000514529 TMEM108-007 processed_transcript Homo_sapiens 7e-27 124
ENST00000514894 TMEM108-011 protein_coding Homo_sapiens 0 224
ENST00000515826 TMEM108-004 protein_coding Homo_sapiens 0 1157

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