C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 108
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189588 Tmem108-001 ENSMUSG00000042757 10090 - 9:103483778-103761837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000189588
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000189588 0.327±0.22 0.623±0.22 0.095±0.00 1.677±0.63 0.125±0.05 0.197±0.02 0.667±0.20 0.573±0.27 0.155±0.07 0.957±0.32 0.047±0.00 0.949±0.41 2.124±0.74 0.322±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Z7 CIL_0007Z7_0002 VISTA 9:103379109-103979657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321871 TMEM108-001 protein_coding Homo_sapiens 0 2037
ENST00000393130 TMEM108-002 protein_coding Homo_sapiens 0 1947
ENST00000508711 TMEM108-003 protein_coding Homo_sapiens 0 749
ENST00000510183 TMEM108-012 protein_coding Homo_sapiens 0 390
ENST00000511388 TMEM108-005 retained_intron Homo_sapiens 0 1663
ENST00000511555 TMEM108-010 protein_coding Homo_sapiens 0 278
ENST00000512137 TMEM108-008 protein_coding Homo_sapiens 0 462
ENST00000512662 TMEM108-009 protein_coding Homo_sapiens 9e-33 145
ENST00000514529 TMEM108-007 processed_transcript Homo_sapiens 1e-29 134
ENST00000514894 TMEM108-011 protein_coding Homo_sapiens 0 250
ENST00000515826 TMEM108-004 protein_coding Homo_sapiens 0 1164

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