C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 72
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042828 Trim72 10090 + 7:128003989-128011393 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081042 Trim72-201 128004378-128011393 protein_coding
  ENSMUST00000106248 Trim72-001 128003989-128011387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081042ENSMUST00000106248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081042 0.127±0.00 0.010±0.00 0.185±0.08 0.290±0.14 N/A 0.952±0.00 N/A 0.148±0.00 0.049±0.00 0.623±0.00 N/A 0.079±0.07 0.133±0.04 0.161±0.05
ENSMUST00000106248 0.164±0.08 0.086±0.04 0.361±0.00 0.134±0.00 6.165±8.60 5.608±1.80 73.429±11.90 0.694±0.56 0.092±0.09 4.036±2.01 55.895±9.36 0.345±0.19 0.128±0.04 0.097±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035T CIL_00035T_0002 CGP 7:127992103-128011393

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001778 IMP plasma membrane repair
GO:0001786 IDA phosphatidylserine binding
GO:0003012 IMP muscle system process
GO:0005515 IPI protein binding
GO:0006887 TAS exocytosis
GO:0006900 TAS membrane budding
GO:0007517 IMP muscle organ development
GO:0008270 IEA zinc ion binding
GO:0030659 IDA cytoplasmic vesicle membrane
GO:0042383 IDA sarcolemma
GO:0051260 IPI protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000177238 TRIM72 tripartite motif containing 72, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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