C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00035T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103490-ENSG00000177238 CGP 9606 16:31201485-31226427
GeneTranscriptPositionBiotype
ENSG00000103490 (PYCARD)
PYD and CARD domain containing 		ENST00000247470 (PYCARD-001) 31201485-31202992 protein_coding
ENST00000350605 (PYCARD-002) 31201486-31202756 protein_coding
ENST00000561508 (PYCARD-003) 31202194-31203450 protein_coding
ENST00000565022 (PYCARD-004) 31201486-31202440 retained_intron
ENSG00000169900 (PYDC1)
PYD (pyrin domain) containing 1 		ENST00000302964 (PYDC1-001) 31215962-31217359 protein_coding
ENST00000568383 (PYDC1-002) 31215962-31216370 processed_transcript
ENSG00000177238 (TRIM72)
tripartite motif containing 72, E3 ubiquitin protein ligase 		ENST00000322122 (TRIM72-001) 31214021-31225189 protein_coding
ENST00000613872 (TRIM72-201) 31214091-31226427 protein_coding
ENSG00000261359 (PYCARDOS)
PYCARD antisense RNA 1 		ENST00000561916 (PYCARDOS-001) 31201885-31203452 antisense
ENSG00000261925 (RP11-388M20.9)
 ENST00000576745 (RP11-388M20.9-001) 31225960-31227160 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00035T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030793-ENSMUSG00000042828 CGP 10090 7:127992103-128011393
GeneTranscriptPositionBiotype
ENSMUSG00000030793 (Pycard)
PYD and CARD domain containing 		ENSMUST00000033056 (Pycard-001) 127992103-127993867 protein_coding
ENSMUSG00000042828 (Trim72)
tripartite motif-containing 72 		ENSMUST00000081042 (Trim72-201) 128004378-128011393 protein_coding
ENSMUST00000106248 (Trim72-001) 128003989-128011387 protein_coding
ENSMUSG00000087530 (Gm15533)
predicted gene 15533 		ENSMUST00000126205 (Gm15533-001) 128002849-128005190 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035T_0001ENSG00000103490ENST00000247470ENST00000350605ENST00000561508ENST00000565022ENSG00000169900ENST00000302964ENST00000568383ENSG00000177238ENST00000322122ENST00000613872ENSG00000261359ENST00000561916ENSG00000261925ENST00000576745CIL_00035T_0002ENSMUSG00000030793ENSMUST00000033056ENSMUSG00000042828ENSMUST00000081042ENSMUST00000106248ENSMUSG00000087530ENSMUST00000126205
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035T_0001ENSG00000103490ENST00000247470ENST00000350605ENST00000565022ENSG00000169900ENST00000302964ENST00000568383ENSG00000177238ENST00000322122ENST00000613872ENSG00000261359ENST00000561916ENSG00000261925ENST00000576745CIL_00035T_0002ENSMUSG00000030793ENSMUST00000033056ENSMUSG00000042828ENSMUST00000081042ENSMUST00000106248ENSMUSG00000087530ENSMUST00000126205
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103490 ENST00000247470 6.944±0.00 10.056±0.00 1.329±0.00 0.772±0.00 3.165±2.60 2.522±1.48 1.526±0.00 3.404±0.00 4.047±0.00 6.623±0.00 N/A 6.370±4.14 11.007±2.95 2.978±2.71
ENST00000350605 9.683±0.00 20.728±0.00 N/A 1.909±0.00 11.726±0.00 6.165±0.00 0.662±0.00 3.521±0.00 N/A 12.147±0.00 1.959±0.00 9.155±0.00 4.874±1.84 7.143±0.00
ENST00000561508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565022 N/A 6.347±0.00 N/A 0.597±0.00 1.614±0.00 6.436±0.32 0.217±0.15 N/A 0.793±0.00 2.054±0.00 1.602±0.76 6.214±2.45 3.532±0.03 N/A
ENSG00000169900 ENST00000302964 N/A N/A N/A 0.630±0.21 N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.076±0.00
ENST00000568383 0.406±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.915±0.00 0.223±0.00 0.410±0.00 N/A
ENSG00000177238 ENST00000322122 0.175±0.00 0.271±0.00 N/A 0.137±0.09 1.169±1.03 0.211±0.00 0.331±0.31 N/A 0.134±0.09 0.055±0.00 33.478±25.01 1.141±1.30 N/A 0.725±0.65
ENST00000613872 0.102±0.00 N/A 0.156±0.00 N/A 0.717±0.20 N/A 0.249±0.00 0.116±0.00 0.042±0.00 0.096±0.00 17.745±9.45 2.086±0.41 0.038±0.00 0.328±0.29
ENSG00000261359 ENST00000561916 2.693±0.00 6.253±0.00 N/A 0.384±0.00 1.902±0.00 2.770±0.00 0.361±0.00 1.010±0.00 0.505±0.41 1.422±0.82 0.176±0.00 7.511±6.76 3.511±1.41 1.540±0.70
ENSG00000261925 ENST00000576745 0.256±0.00 0.305±0.00 N/A 0.150±0.00 1.938±0.00 0.117±0.00 0.429±0.00 N/A N/A 0.176±0.04 30.759±19.36 1.974±1.65 0.054±0.00 0.770±0.74
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030793 ENSMUST00000033056 10.656±5.96 3.106±0.75 18.039±1.54 1.114±0.59 18.755±4.86 96.028±22.83 3.958±2.07 11.775±1.98 3.443±2.90 10.620±0.83 0.298±0.24 14.851±6.74 2.822±2.74 0.749±0.34
ENSMUSG00000042828 ENSMUST00000081042 0.127±0.00 0.010±0.00 0.185±0.08 0.290±0.14 N/A 0.952±0.00 N/A 0.148±0.00 0.049±0.00 0.623±0.00 N/A 0.079±0.07 0.133±0.04 0.161±0.05
ENSMUST00000106248 0.164±0.08 0.086±0.04 0.361±0.00 0.134±0.00 6.165±8.60 5.608±1.80 73.429±11.90 0.694±0.56 0.092±0.09 4.036±2.01 55.895±9.36 0.345±0.19 0.128±0.04 0.097±0.05
ENSMUSG00000087530 ENSMUST00000126205 0.097±0.00 N/A 1.212±0.00 0.678±0.00 0.489±0.23 0.550±0.29 0.090±0.00 0.295±0.14 N/A 0.401±0.28 0.146±0.02 0.317±0.10 0.163±0.03 0.464±0.21

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